Transcript Information: R_Transcript_277199.p1


Annotated TAIR IDAT2G19070.1
Annotated Gene Namespermidine hydroxycinnamoyl transferase
Annotated Gene Symbol(s)SHT
Annotation TypeHomolog
Chromosome Positionchr2:8260185-8261958 | Reverse length=451
E-Value8E-108
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.8081478391875
Replicate 22.2431944889207
Replicate 32.6430851072484
Condition 2: 8 Hour
Replicate 11.9358482971113
Replicate 22.1978644544755
Replicate 32.7925554800595
Condition 3: 24 Hour
Replicate 12.5999226133938
Replicate 22.5919641858584
Replicate 32.431967187433


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_277199.p1 GENE.R_Transcript_277199~~R_Transcript_277199.p1 ORF type:complete len:468 (+),score=69.61,Transferase|PF02458.11|1.3e-97 R_Transcript_277199:260-1663(+)
ATGGCAGTGACTACAAAAGCTTGCCATGTAGTGAAACCATCCAGCCCAACATGGAGTGGTATACTTCCCCTATCAGAATTAGACCAAGTAGGAGTGATTACACGCACACCCATGATATACCTATACAAGAAACCTCCCAAAAATTTGCACAATCCATCTATTGACACTATCATCAATAGACTCAAGGAGTCATTGAGCCTTGCCCTTGTTTCATTTTACCCCTTGGCGGGCCGGTTGAGTCCCATAGGCGGAGCTCGATTCGAGCTCCATTGCAATGCCAAAGGAGCATTGCTCATTCAAGCTGAGTCCTCCAACACTTGTATAAGTGATTTTGGTCCTGAATTTTCTCATATTCAAATGTTGGAAGATCTTTTTCCTTATGTAGACTACAAGAAGAAGTCAATCCATGAGCTTCCACTTCTCTTTGTGCAAGTAACTTGCTTTAGATGTGGTGGTTTTAGCATTGCTTTGAGGGCTTCTCATGTCATTGTGGATGGACAAAGTGGGCTCCATTTCTTGAGAGAGTGGGCCCGACTTGCTCGAGGTGAGCCAATCGAAGTTGTACCTTTTTTTGATCGTCAAGTCCTACAAGGCACAGGGGTTAACCATGGTGAATCTCTTAAGGATCGTTTAGTACTTGGGAATCATCATGCAAAAAGTCTTAATGATCTTCCTGTACTTATAAGTGATGAAATTGATTTGGATGAGATTAAGAGAGAAGAAATGCTAGCCACCACGCTAGCTTTGAATAAAAGTCAAGTTGATAGACTTAGGAAGGCTGCTAATAGTATGGGAATTTATACCAAGCATAAGGGTTGCCCCTATAGTCGTTATGAGGTTGTTGCAGCTCATATATGGAGATGCTCATCCAAGGCACGCCAGCACAAGAGCCAGCAACCAACTGTCCTGTGTTTTTGTGTTGACTCGCGGAGTCGAATCAACCCACCACTACCATCCAGTTACTTCGGCAATGGCATCATACATGGCCGATCATTCATCCGAGCGGGGGAGCTCGTCTCAAGGCCTCTAAGCCACGCTTGCAGCATAATAAGAGCAGCAATAGAGAAGGTGAATAACACATATGTTGGATCAGCCATTGAGTACTTCAAATGTCAGCAAAGCTTGTCCCATTACCAGGTGGATGATGACTATGAATTTGGTAACCCAAACCTCAGCATTGTAAGTTGGTTAAACTTGCCAGTCCGTGGCATGGACTTTGGTTGGGGAAATGAAGTGTATGTTGGGCCAGGAATTCATGCTTGTGATGGTGATATTACCATTTTGCCTGGATATCAAAATGATGGATCTCTTCTTGTTGATGTGTGCTTGCAAGCTGCCTACATGAATGACTTCAAGAAATATTTCTATGAGGATGTTGGATTTGAACCAAAATCTAAGATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_277199.p1 GENE.R_Transcript_277199~~R_Transcript_277199.p1 ORF type:complete len:468 (+),score=69.61,Transferase|PF02458.11|1.3e-97 R_Transcript_277199:260-1663(+)
MAVTTKACHVVKPSSPTWSGILPLSELDQVGVITRTPMIYLYKKPPKNLHNPSIDTIINRLKESLSLALVSFYPLAGRLSPIGGARFELHCNAKGALLIQAESSNTCISDFGPEFSHIQMLEDLFPYVDYKKKSIHELPLLFVQVTCFRCGGFSIALRASHVIVDGQSGLHFLREWARLARGEPIEVVPFFDRQVLQGTGVNHGESLKDRLVLGNHHAKSLNDLPVLISDEIDLDEIKREEMLATTLALNKSQVDRLRKAANSMGIYTKHKGCPYSRYEVVAAHIWRCSSKARQHKSQQPTVLCFCVDSRSRINPPLPSSYFGNGIIHGRSFIRAGELVSRPLSHACSIIRAAIEKVNNTYVGSAIEYFKCQQSLSHYQVDDDYEFGNPNLSIVSWLNLPVRGMDFGWGNEVYVGPGIHACDGDITILPGYQNDGSLLVDVCLQAAYMNDFKKYFYEDVGFEPKSKI*

Click here to download the sequence:
Link to NCBI Protein BLAST