Transcript Information: R_Transcript_27759.p1


Annotated TAIR IDAT4G18930.1
Annotated Gene NameRNA ligase/cyclic nucleotide phosphodiesterase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:10370797-10371885 | Forward length=181
E-Value8.3E-72
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 154.961693541431
Replicate 255.64019610319
Replicate 365.02968284241
Condition 2: 8 Hour
Replicate 152.916674802658
Replicate 252.299618084106
Replicate 348.706821831372
Condition 3: 24 Hour
Replicate 172.572179514242
Replicate 271.924649826494
Replicate 354.111269920385


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_27759.p1 GENE.R_Transcript_27759~~R_Transcript_27759.p1 ORF type:complete len:180 (+),score=30.41,CPDase|PF07823.7|6.2e-16,2_5_RNA_ligase2|PF13563.2|6.8e-09 R_Transcript_27759:142-681(+)
ATGGCAACGAACGTGTATTCGGTGTGGGCACTTCCACCCGAAGATGTGAGGACGAGGGCAAAGAAACTGATGGAGACCCTTGGATCAGAGTTTGGTGGGCCCGAGTTCGAGCCCCATGTCACGGTTGTGGGGGCCATCAGCTTGACACCGGAAGATGCACTTGAGAAATTCAGATCAGCGTGTAAGGGATTGAAGGCCTATACTGCTCACGGTAGGGGTATCTCCACTGGAACATTCTTTTACCAGTGTGTTTTCCTCCTCCTTGACCCCACCCCTCATGTTGTCAAGGTTAGTGATCACTGCTCCGAGCATTTTGGCTATGTTCGTCCCACACCTTACATGCCACATATGAGCCTTCTCTATGCAGACTTGACGGATGAGGAGAAGAAGAAAGCTCAAGACAGAGCTAATGCTCTCGATGAAAACTTTGGCAGTGTGTCCTTTCCGCTTACTCGCCTGGTACTCTACAAAACTGATACTGAAGACAAGACCCTCAAATCCTGGGAAAAGGTGGCCGAATGTGACCTCGAAGCAGTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_27759.p1 GENE.R_Transcript_27759~~R_Transcript_27759.p1 ORF type:complete len:180 (+),score=30.41,CPDase|PF07823.7|6.2e-16,2_5_RNA_ligase2|PF13563.2|6.8e-09 R_Transcript_27759:142-681(+)
MATNVYSVWALPPEDVRTRAKKLMETLGSEFGGPEFEPHVTVVGAISLTPEDALEKFRSACKGLKAYTAHGRGISTGTFFYQCVFLLLDPTPHVVKVSDHCSEHFGYVRPTPYMPHMSLLYADLTDEEKKKAQDRANALDENFGSVSFPLTRLVLYKTDTEDKTLKSWEKVAECDLEAV*

Click here to download the sequence:
Link to NCBI Protein BLAST