Transcript Information: R_Transcript_27762.p1


Annotated TAIR IDAT4G18930.1
Annotated Gene NameRNA ligase/cyclic nucleotide phosphodiesterase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:10370797-10371885 | Forward length=181
E-Value3E-45
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.6423715722984
Replicate 25.0973677311244
Replicate 35.2963555135613
Condition 2: 8 Hour
Replicate 11.1322943328206
Replicate 22.8435803497461
Replicate 33.9870589802006
Condition 3: 24 Hour
Replicate 16.1043880489849
Replicate 22.4222538665952
Replicate 34.8077039196653


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_27762.p1 GENE.R_Transcript_27762~~R_Transcript_27762.p1 ORF type:complete len:173 (+),score=30.75,CPDase|PF07823.7|2.6e-08,2_5_RNA_ligase2|PF13563.2|4.8e-07 R_Transcript_27762:226-744(+)
ATGGCAACGAACGTGTATTCGGTGTGGGCACTTCCACCCGAAGATGTGAGGACGAGGGCAAAGAAACTGATGGAGACCCTTGGATCAGAGTTTGGTGGGCCCGAGTTCGAGCCCCATGTCACGGTTGTGGGGGCCATCAGCTTGACACCGGAAGATGCTCTTCAGAAATTCAGATCAGCGTTTAAGGGATTGAAGAACTATACTGCTCACGGTAGGGGTATTTCCACTACAATCCTCCTCCTTGACCCCACACCTGATGTTATCAAGGTTAGTGATCACTGCTCTGAGCATTTTGGCTACGTTCGTCCCACACCTTACAAGCCACATATGAGCCTTCTCTATGGAGACTTGACGGATGAGGAGAAGAAGAAAGCTCAAGACAGAGCTAATGCTCTCGATGAAGGCTTTGGCACTGTGTCCTTTCCGCTTACTCGCCTGGTACTCTACAAAACTGATACTGAAGACAAGACCCTCAAATCCTGGGAAAAGGTGGCTGAATGTAACCTCGAAGCAGTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_27762.p1 GENE.R_Transcript_27762~~R_Transcript_27762.p1 ORF type:complete len:173 (+),score=30.75,CPDase|PF07823.7|2.6e-08,2_5_RNA_ligase2|PF13563.2|4.8e-07 R_Transcript_27762:226-744(+)
MATNVYSVWALPPEDVRTRAKKLMETLGSEFGGPEFEPHVTVVGAISLTPEDALQKFRSAFKGLKNYTAHGRGISTTILLLDPTPDVIKVSDHCSEHFGYVRPTPYKPHMSLLYGDLTDEEKKKAQDRANALDEGFGTVSFPLTRLVLYKTDTEDKTLKSWEKVAECNLEAV*

Click here to download the sequence:
Link to NCBI Protein BLAST