Transcript Information: R_Transcript_277938.p1


Annotated TAIR IDAT2G38420.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:16091093-16092454 | Forward length=453
E-Value3E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.40263884458938
Replicate 20
Replicate 30.16843189408936
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.1334677251499
Condition 3: 24 Hour
Replicate 10.16880740608606
Replicate 20
Replicate 30.48281701515215


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_277938.p1 GENE.R_Transcript_277938~~R_Transcript_277938.p1 ORF type:internal len:136 (+),score=15.99,PPR_1|PF12854.3|21,PPR_1|PF12854.3|0.49,PPR_1|PF12854.3|0.00012,PPR|PF01535.16|0.027,PPR|PF01535.16|1.5e+02,PPR|PF01535.16|0.0042,PPR_2|PF13041.2|1.6e+03,PPR_2|PF13041.2|0.021,PPR_2|PF13041.2|0.09 R_Transcript_277938:1-405(+)
ACTGCCTATCAATTCATCATCAAAACCCTACTTCAAAATTCCCAATTCACTGAACTCAACCATGTTCTCTCCCACCTCCAAAAGGTTGAAAATTTTGAAACCCCAGAAAGTATTTTGGTTAATTTGATTAGGGTTTATGGAGGAAAGGGTATGATTAATGAAGCTATTGATTTGTTCTTCAAGATTCCCTCTTTCAGGTGTGTTCCTACTGTGAATTCACTCAATTCATTGATTTTGATATTATGTAGAGAAAGAGAATTTTTTAGATTTGTTCCTCAATTGCTGTTAAAGAGTAGGGTTCTGAATATTCGGATCGAGGAATCAAGTTTTTCGATTTTGATTAGTACCCTTTGTAGGATTGGTAGGGTTGATTATGGTCTTAAGTTGATCAAGTATATGATTGAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_277938.p1 GENE.R_Transcript_277938~~R_Transcript_277938.p1 ORF type:internal len:136 (+),score=15.99,PPR_1|PF12854.3|21,PPR_1|PF12854.3|0.49,PPR_1|PF12854.3|0.00012,PPR|PF01535.16|0.027,PPR|PF01535.16|1.5e+02,PPR|PF01535.16|0.0042,PPR_2|PF13041.2|1.6e+03,PPR_2|PF13041.2|0.021,PPR_2|PF13041.2|0.09 R_Transcript_277938:1-405(+)
TAYQFIIKTLLQNSQFTELNHVLSHLQKVENFETPESILVNLIRVYGGKGMINEAIDLFFKIPSFRCVPTVNSLNSLILILCREREFFRFVPQLLLKSRVLNIRIEESSFSILISTLCRIGRVDYGLKLIKYMID

Click here to download the sequence:
Link to NCBI Protein BLAST