Transcript Information: R_Transcript_277949.p1


Annotated TAIR IDAT5G09310.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Gamma-secretase aspartyl protease complex, presenilin enhancer-2 subunit (InterPro:IPR019379); Has 168 Blast hits to 168 proteins in 71 species: Archae - 0; Bacteria - 0; Metazoa - 126; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2887403-2888501 | Reverse length=146
E-Value1.2E-70
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 127.765067367741
Replicate 219.961271522537
Replicate 332.585640805794
Condition 2: 8 Hour
Replicate 123.796122272675
Replicate 233.69879376066
Replicate 330.295293781914
Condition 3: 24 Hour
Replicate 127.161349396157
Replicate 224.074402310137
Replicate 329.902920487733


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_277949.p1 GENE.R_Transcript_277949~~R_Transcript_277949.p1 ORF type:complete len:142 (+),score=15.93,PEN-2|PF10251.5|1.1e-28 R_Transcript_277949:183-608(+)
ATGGAGAGGAGATCAGAAGCAGGGGGGCAAGAGGAGCCAAGTCTCCTCCCACTACGCAACCCAACTCCCTCAACAATTTCATCATCATCACTTCGTTGGCCTACAATTGACGGTCCATTGGGTCTCTCTGAGGAAGAATCTTTAACCTACGCTCGTAGATTCTACAAATTCGGGTTTTTACTCCTCCCTTGGCTTTGGGCTGTCAATTGCTTCTACTTCTGGCCTGTTCTTCGCCACTCTCGTTCCTTCCCTTCCTTTCGTCCCTATGTTGTCAGATCTGCCATAGGATTTACTATCTTCACGGTTCTTCTGTCTTCGTGGGCATTAACATTCTCAATTGGAGGGGAGCATCTTTTCGGGCCAGTTTGGAATAAACTTGTAATGTACAATGTAGCTGATGAGTTGGGTTTGACGGGCTGGATGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_277949.p1 GENE.R_Transcript_277949~~R_Transcript_277949.p1 ORF type:complete len:142 (+),score=15.93,PEN-2|PF10251.5|1.1e-28 R_Transcript_277949:183-608(+)
MERRSEAGGQEEPSLLPLRNPTPSTISSSSLRWPTIDGPLGLSEEESLTYARRFYKFGFLLLPWLWAVNCFYFWPVLRHSRSFPSFRPYVVRSAIGFTIFTVLLSSWALTFSIGGEHLFGPVWNKLVMYNVADELGLTGWM*

Click here to download the sequence:
Link to NCBI Protein BLAST