Transcript Information: R_Transcript_27805.p1


Annotated TAIR IDAT1G20970.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: guard cell, cultured cell; BEST Arabidopsis thaliana protein match is: proton pump interactor 1 (TAIR:AT4G27500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:7314338-7319246 | Forward length=1364
E-Value0.0006
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.269040228252
Replicate 26.1851404160878
Replicate 39.3850403469564
Condition 2: 8 Hour
Replicate 14.6705543748131
Replicate 25.5523634368632
Replicate 36.9451422125408
Condition 3: 24 Hour
Replicate 113.577755064692
Replicate 211.326346269992
Replicate 316.502242359873


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_27805.p1 GENE.R_Transcript_27805~~R_Transcript_27805.p1 ORF type:complete len:886 (+),score=195.99,CH|PF00307.27|1.5e-05 R_Transcript_27805:217-2874(+)
ATGGCCGTGACTACGGAATCGAGTGAGTTTAATTCACTGTCACCGTCGCCGTCGCCGTCATCGGGAACTAACTTCCGTGAGCTTGACGATGCTTTCTTGCAGTCTCAAACAAGAATATGGCTTGGAGAAGTTTTGCAGATAAGATTTGATGAGGAGACGAACATTGGTGATTTACTTGCTGATGGAGAGTTGCTGCTTGAAGTGTCCGAGGTATTATCAAGAACGTTTCCGACCCTTGGTGTGGATGCGACTCAAATGAAAGTGAATGAAGGGAAATCCGCTGCCACAAACAAAAGCACCAGGAGATACATGCCCTATTACAATGTTGGTTCATTTTTAAGGATGTGCAAAAAGTTGGGCTTGGATGGCATTGATCTCTTTGATCCATCTGATGTTGTGGACAAGAGGAATACAAGAAAAGTTTGCATGTGCATACGTTCTCTTTCAAAGAAAGTGATGTCAAGAGAGCTAAATGTAACCGCACCTGACTTTGATAGCGTTACTTGCACTTTATCCATGCCTACTGATATGGTTCAATGCATTCGGAAGAGCCTAGAGCTTTCACAGTCCAGCGCTTCCCCTTCTGCTGGACCTGACGCTGGAAAGGTTTCAAGGGTCAGATATTGGCGGAGGATGTCTGATTCTACCTCTGCCCAAAGTAATGGAGACTCCTTTGACTATTGTGATGAGGCTGAAAGCTGTTTTGTGGTTCCCGAATCTAATGGACCTTCAGACTATGTTTATGACGCTGCATGTTCAAGTAATCCTGATTCACAGATGGTCAGAGACAACTGTTCTGAAAACCTAAAACTTCATCTGAACACTGAAGACAGAGAAAATGAGGAAGATGAGCAGTGTGAATACCTGTCACCGTCTATTGCTGAGTCTGTGGGTTCATTTTGCTCACAGTATTACAGTGACCAGGAGCTGAGCAGCATGCCATCCTCACCAGGTCTTGGTTCATGTGTCAATGGTAAAGTTCTGGAGGTAGAGACAGAACATGGATATCAAAATGGTGATGTGACCCATGTCCCTATTGACTGGGAACATAGTTCTCTGAATGGTGGTAACCATATAGATGGAAATGCAAAGAATGGTGTAGCTGCTAATGTATCCCATGAAAATGCAAATAATGGTGAAACTGATAATGTATCCCATGATAAAGAAGATGTAGACTCAACTTGCTTTGATGGTGGTTATCCAACCAAGGAAAGCAAGAGTTGCAATGCGCATATTGAAAATTCATCATATCATTCCGAAATTGAATGTGAGAAGAGCTCATCTGATGACATTCAGATGAGTGAATGTGTTGTAGAAGATGACTTTTGTGCTGGCAAGAGTCCAGATCTGAGTCTTGAGGAGGAGCAATTGGACAATAATGCAGCGAAACATGAAATGGCAAACAACGATTTAAGCCCTGAAATAGGTGTATCCTCTTCAGATGGGAAATTCAAGGACGGTGATCTTTCTAACAAGCTCTTGATACAAAGCCCTTATCATGTTTCCAGTCATACAAAAACTCCATATTGCTCTTCATATGGTGATGTGAATCAGAAATCTCAATTATCTACAGAAGTAAATACTGGAGGAAATTTTTGTTGTGATAGTTTAAACAGTGCAAATACTACAGAAGATTTATCAGGTCAGGTGGTACCACTCGCACAGCAGTTCTCTTGTTCCGTTGGCTCTGAGGCACACAGTTACAATTCTTCAAGTCTTGATCCAAGAGCTGTTGCTCAAAGCTCGGCATCTGCTCCTTTGATCCATGACAGAGGTAACAGTACTTTTACAGACATTCAAAATGACAAACAGGCACTTGACGCCAACATGATTGCCTCTAATCTTTCGGGTCACCCTGACAATCATTGTGTGGGTGACAATCCAAGTGATTTTAGTGAAAAACCTGGAACGGGTTTTAATTCCTCAGCCTATATAGTTGGGGCTGAGGCAAGCAAATCATGCTCAGATGATAGTCAAGATACTCGGGAAGTATCTGCGGATAACAATGATCACGCTGAGATTATTAATGGCAAGCATACCAACACAGAAGCGGCAAGTTTTTGCCCAAAGGATGATTTTATGGGTGGTGACGGACTTGATTCCTTGGACATGCCTGACAAGAAATTGAATTCTTCACCATCTATAACCAAGACTAAGGACTGTATAAACGGCTTAGATGACAGTCAAGATACCTTGAAGGTATCCGGGGCTTATAATGTGACGGCTGAGAGTACTACTGGAAAGCCTATTGATGTAGAAAATGGAACTGCAATGGATAGCTCTGCTACCATCCTTTCTGCTTCTCTACCAGGAGCTGAAAATCCTGAAAGTATTGAAGATGCAGCTCATAAGCTTCACCAACGTGCAGAAAACTTGGTTAAGGGTGAAAAAGAACATAACAATACCAATAAAGAAACGTCACAAAGCCAGCCTCGAAGGAAATTGATAAAATCAGTCGTGAAGGGAACAGCACTAGTTGGCATTGCTGTTGTCTTGATTCACCTCAGGAAGTATGCTAAAATAAATCTTCCCAGAGCAAAGAAGCAGCCCGTTGAGACCCTTATACGTAATAGATCCAAGTCATCACGTCAAATGGGTCAGAAGGTTTCTAGTACTAGCAGTGTATATCCAGCTGAGAAGCTTAAGCTTGGTATATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_27805.p1 GENE.R_Transcript_27805~~R_Transcript_27805.p1 ORF type:complete len:886 (+),score=195.99,CH|PF00307.27|1.5e-05 R_Transcript_27805:217-2874(+)
MAVTTESSEFNSLSPSPSPSSGTNFRELDDAFLQSQTRIWLGEVLQIRFDEETNIGDLLADGELLLEVSEVLSRTFPTLGVDATQMKVNEGKSAATNKSTRRYMPYYNVGSFLRMCKKLGLDGIDLFDPSDVVDKRNTRKVCMCIRSLSKKVMSRELNVTAPDFDSVTCTLSMPTDMVQCIRKSLELSQSSASPSAGPDAGKVSRVRYWRRMSDSTSAQSNGDSFDYCDEAESCFVVPESNGPSDYVYDAACSSNPDSQMVRDNCSENLKLHLNTEDRENEEDEQCEYLSPSIAESVGSFCSQYYSDQELSSMPSSPGLGSCVNGKVLEVETEHGYQNGDVTHVPIDWEHSSLNGGNHIDGNAKNGVAANVSHENANNGETDNVSHDKEDVDSTCFDGGYPTKESKSCNAHIENSSYHSEIECEKSSSDDIQMSECVVEDDFCAGKSPDLSLEEEQLDNNAAKHEMANNDLSPEIGVSSSDGKFKDGDLSNKLLIQSPYHVSSHTKTPYCSSYGDVNQKSQLSTEVNTGGNFCCDSLNSANTTEDLSGQVVPLAQQFSCSVGSEAHSYNSSSLDPRAVAQSSASAPLIHDRGNSTFTDIQNDKQALDANMIASNLSGHPDNHCVGDNPSDFSEKPGTGFNSSAYIVGAEASKSCSDDSQDTREVSADNNDHAEIINGKHTNTEAASFCPKDDFMGGDGLDSLDMPDKKLNSSPSITKTKDCINGLDDSQDTLKVSGAYNVTAESTTGKPIDVENGTAMDSSATILSASLPGAENPESIEDAAHKLHQRAENLVKGEKEHNNTNKETSQSQPRRKLIKSVVKGTALVGIAVVLIHLRKYAKINLPRAKKQPVETLIRNRSKSSRQMGQKVSSTSSVYPAEKLKLGI*

Click here to download the sequence:
Link to NCBI Protein BLAST