Transcript Information: R_Transcript_278119.p2


Annotated TAIR IDAT2G40430.2
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: P60-like (InterPro:IPR011687), Tumour suppressor protein Gltscr2 (InterPro:IPR011211); Has 706 Blast hits to 639 proteins in 197 species: Archae - 0; Bacteria - 32; Metazoa - 228; Fungi - 147; Plants - 47; Viruses - 0; Other Eukaryotes - 252 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:16879527-16882365 | Reverse length=449
E-Value1E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.0263884458938
Replicate 23.0876912376909
Replicate 35.8951162931275
Condition 2: 8 Hour
Replicate 14.6811212399145
Replicate 24.7681292161352
Replicate 36.8068539826451
Condition 3: 24 Hour
Replicate 17.9339480860448
Replicate 26.649011871424
Replicate 38.3688282626372


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_278119.p2 GENE.R_Transcript_278119~~R_Transcript_278119.p2 ORF type:internal len:136 (-),score=29.97,Nop53|PF07767.7|5.8e-17 R_Transcript_278119:2-406(-)
CTTTCTCCTCTTCTCGAAGTATGGAGGCGCCGACTCAAGCAGAAGAGGAGAAAGATGGGGAAGAAGAGAGCGAAGAAGGTGAAGAAAGCATGGAGAAATATTAGCACTCAAGATGTCGACGACTTCAACGCTAAAGTCACTCGTGACGCTCATTCTGGTGGTTCTCTTGCCTCTGCCTCCAACGATTCCCTCTTTGTCCTTGACAAATCCACTGATGTCCCCGTAAAGCGAAAGATTGAGAAGAAAAGGGAGAAAGTGCTTCGCGTTGAAAGTATTCTTCAGAGAAACCCCTTCGTTACGCCAGTTCCTTCTTCCACCCCTAAGAAGTCCAACAAAAAGGCTAAACAAAGTGCTGAGCTGACTCATCCTCTCAATGATTCTAAAGATAAGGAGTTTAAAGGATCG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_278119.p2 GENE.R_Transcript_278119~~R_Transcript_278119.p2 ORF type:internal len:136 (-),score=29.97,Nop53|PF07767.7|5.8e-17 R_Transcript_278119:2-406(-)
LSPLLEVWRRRLKQKRRKMGKKRAKKVKKAWRNISTQDVDDFNAKVTRDAHSGGSLASASNDSLFVLDKSTDVPVKRKIEKKREKVLRVESILQRNPFVTPVPSSTPKKSNKKAKQSAELTHPLNDSKDKEFKGS

Click here to download the sequence:
Link to NCBI Protein BLAST