Transcript Information: R_Transcript_27857.p1


Annotated TAIR IDAT5G22450.1
Annotated Gene Nameunknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G19390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:7437145-7442856 | Reverse length=1154
E-Value3E-159
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.140304808044
Replicate 27.3930635268655
Replicate 39.1591102594944
Condition 2: 8 Hour
Replicate 19.3690046629131
Replicate 212.720157354102
Replicate 313.933278574804
Condition 3: 24 Hour
Replicate 111.640578312639
Replicate 28.4389840355965
Replicate 310.293044222868


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_27857.p1 GENE.R_Transcript_27857~~R_Transcript_27857.p1 ORF type:complete len:1278 (+),score=314.28 R_Transcript_27857:280-4113(+)
ATGGCTGGAAATGCAAAGTTTGAATTGAGTTCCGTTAGTCCAGAGGACTCGGGATTTTCTGGGGGTTATCCGAATGGGCGGGGGAATTATCCAGGTCCTAACTTGGATAGGTCTGGAAGCTTCCGTGAGGCAAGTGAAGGTAGGTCTTTTAGCTCGGGAACCGGCACATCCAAGGCAAATGCTATGGCGGTGGCGGATTTGCCGCCATTGCCCCAGTGTTTAAATTTGGAACCAATGACGATGGTGGATCAGAAATATACACGGGCAGGCGAATTGAGGAGGGCATTAGGTTATTCCTTTAGTAATGTCACAGAAGATAATTCTTTTGGAGTTGCTCACTCAAAACCTCCACCTACTTTGGCGACAGATGAATTGAAACGCTTTAGAGCAAGTGTCTTGGAAGGATCCCTGAAGGCCAGGAATAGAGTGAAAAGATTGGATGAGTCGCTAAATAAGTTGAGCAAGTACTGTGATGCCTTGAACTCAAAGAAGCAACAGACAAATGAAAGATCTGGTGGGTCAAACTTGATGAAGATGGGAACTCAGTCTCATCGTATCTCACCAGACCTTGCGACGCAAAAGTTAGAGGAGAGGAATAAGAACATTGTCCTGAATAAGCGTGCCCGCACACCAATGGGAGAAATGCGGGCTGAAGGGCGGAGCAATGGACTCCCAAGGCAACATCTAGTTGTGGGAAAGGATAAAGATTCAGGAAAAGAGGGTAGCTCTGATCTTGTTGAAGAAAAGATTCGTAGATTACCTGCTGGTGGTGAGGGTTGGGACAAAAAAATGAAAAGAAAACGCTCAGTTAGCAGTGTTTTCCATAGGCCAATTGATGGCGATGGAGAGCTTAAGAGGAACATGCATGGTAGGCTTGGAAATGACCCTGGAATTCAGACTTCTGACTCTCATGGCTTCAGGTCTGGGTCTTCCAATGGTGCTAATGGCATTAACAAGCTAGAAGGAGCTTCATCACCTGCTAGTTTGAGCGCCCGTATGACCCCCAAGAATGAATTGGAAAAGGCTTCTCTATCTAGGGAACTAACTGGAACCCACAAGGAAAGATTATTACAGAAAACAAATAATAAGTCAAATATACGTGAAGACACCCATTTGTTCAGCCCTAGCTCTGTGACCAAGGGAAAGGCTTCAAGAGCTCACAGAACTGGTCCTGCAACTGCAGGAAACTCTTCTCCTAGCTTTTCTCGGATGGCTGGAACACCTGAAGATTGGGAACAACCCCTAAATGCGAATAAAGTCCATTCATTAGCTGGAGTTAATAACCGCAAACGTCCGCTTCCTACTGAATCATCGTCACCCCCAATGGCTCAATGGGTGGGGCAAAGACCACAGAAAATTTCCCGTAATCGGCGAACAAATATTGTATCGCCGACATCCAACCATGATGAGACGCAGATGTCGTCTGAAACTTGTGCTTCTGATTTTAGTGCCAGAATTCCTGGTGGGATGAATGGATCACTTCCTGTCAGAACTGTGGCGAGTAACTCTCAGCAGCTAAAAGTAAAACTTGAAAATGCCCCATCACCCGCTAGATTATCTGAAAGCGAGGAGAATAGTACTGCTGAAAACAGACTGAAGGATAAAAGCCTTGGTGGTTCTGAGTTAGATGAAAGAAGTATAAATGGTCATCAACATGTCAGTCCTTCAGGAATGTTCCCAAAGAAGAGCAAGTTAATCTCTAAGGAAGATATTGGAGATGGTGTACGTAGACAAGGTCGTACTGGAAGGGGCTCATCGTTCTCTAGGGGAAGCATGTCTCCATTGCGGGAAAAATTGGAGAATGCAGCTGCAACAAAACCTGTTCGAAGTACAAGACCTGGCTCTGAGAAGAATGGAAGTAAATCAGGCCGTCCTCCTCTTAAAAAGCACTCGGAGCGGAAAGGTTTTACTCGTCTTGGAGTAGTGCCGAATAGTAGTTCTCCAGATTTCACAGGAGAATCAGATGATGATCGTGAAGATCTTGTAGCTGCAGCGCAGTTTGCTTGCAATGCTAGCTACAATGGATGTTCATCTTCATTCTGGAAAAAAATGGAGCCGCTTTTCTATGCCAAACTGGAGGACAAATCCTTTCTGGAAGAACAGTTGAAATCGGTAGAGGAGCATGAGTCAAAATCTGGTGCGATTCCACTCCAGGGTGATAATGTTGTGAATCGTGTTTTGCAAATTGAACATTTGCAGCCTGAAAGTTTTGCTCCTGGAGAAAGCAATAAATGTGTCCTGGATAATGGATCGATGGAGTCAGCAAAGACTGGAAGCCTTGTCAATCAATTTCAGGACCAAGATTCTTCATGTAGTGGGCTGGATGCTGAAAAAGGGCTCAATAGCCTCACGCCACTGTACCAGAGAGTCCTCTCTGCACTCATTGTAGAAGATGAATTTGAAGAAATTGAAGATAACAGTTTTGGGTCCAGTGGTGGTTCATTAGCTAATAGGGATGATGCATTTACTGCAGCAGATAGAATATCCTGTAATGGGAATGCTAATCATACTAGGTTTTCAAGCATCCAGTTTCCTATGCATGAGGAAATTGAGGAAGGCGATTATAGTTTTATGCACCAAGTGGGCCAGCCAGGCCCTGGCCTTGTCCAAAGTAATGCAAATGGGCCATTGTCTATTTCCACGAACACTTCTGGCGATTCTTCAATTGAATGTCAGTATGATCAGATGTGTATGGACGAGAAGCTATTGATCGAACTGCAAAGTGTTGGCTTAGATGCAGAGACAGTGCCTGATCTAGCCGAGGGAGAGGATGAATTGATCAATCAAGATATTGGCCAACTCAAGAAGCAACTTTATCAGCAGGCTGGAAAGAAGAGGGCTTACTTAGACAGATTACATAAAGTTTTAGAAGAGAGAAAGGAGGTCGAAGGACGGGAACTCGAACAACTTGCAATGAACAGATTGACTGAGTTGGCTTACCGGAAGCTTCTGGCCACTCGAGGAAGCAGTGCTGCCAGAATTGGGATCAGTAAGGTCTCTAGACATGTGGCCTTGGCCTTTATTAGGAGAACCTTGGCTAGATGTCGAAAGTTTGAAGATGCGGGGAAGAGTTGCTTCACTGAGCCTGCACTTCGTGATGTTCTTTTTGCTGTGCCCAACAATAATGCAGGAGCTGTTAATAGCACGAGTCAAGCAGAACAAAACATGCGGCGGGAGGCCAGAACTTCTGGTTCTGAACAGCTTGACTCCCAAAATGATAAATCTGAAAGGGGTCCATTTGATGCATATGAAGCTCTATCCCACCAATCTGACCATGCTTTTGCTAAAAACGGACCTATATTGAACAGAGGGAAGAAGAAGGAAGTGCTGCTTGATGATGTTGGCGGTAATGCTTCTGTAAGATCCACTTCAAATCTTGGATCAAATATTTTGGGTGGAGCAAAGGGAAAGAGAAGTGAGAGAGATTCTGGTGCCAAAGCTGGCCGCCCATCAATAGGTAATTTAAGGGGTGAGCGTAAAGCAAAAGCGAAACCAAAGCAAAAGGCTGCGCAAATGTCCACACATCCTGTGCAACCTTCAGTTTCCAACGAGCTGGTTGCTAGTGGTAGCAATAGAAAACGAGAAGGGCTAATATCTCCTGGAAACATTCTTGATTCATCCAAAGAAAGCAAGGATTCTATGGAGCTTGGTAGTAATTTACCATTACATGAACTAGACTCGATTGAAGATCTTGGTGTAACAAATGAATTCGAAGGACATCAAGATCTAAGTTCTTGGTTGAATTTCGATGAAGTGGATGGTTTACTAGACCATGACTCGATGGGCCTTGAAATACCAATGGATGACCTCTCTGAGTTGAATATGCTTCTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_27857.p1 GENE.R_Transcript_27857~~R_Transcript_27857.p1 ORF type:complete len:1278 (+),score=314.28 R_Transcript_27857:280-4113(+)
MAGNAKFELSSVSPEDSGFSGGYPNGRGNYPGPNLDRSGSFREASEGRSFSSGTGTSKANAMAVADLPPLPQCLNLEPMTMVDQKYTRAGELRRALGYSFSNVTEDNSFGVAHSKPPPTLATDELKRFRASVLEGSLKARNRVKRLDESLNKLSKYCDALNSKKQQTNERSGGSNLMKMGTQSHRISPDLATQKLEERNKNIVLNKRARTPMGEMRAEGRSNGLPRQHLVVGKDKDSGKEGSSDLVEEKIRRLPAGGEGWDKKMKRKRSVSSVFHRPIDGDGELKRNMHGRLGNDPGIQTSDSHGFRSGSSNGANGINKLEGASSPASLSARMTPKNELEKASLSRELTGTHKERLLQKTNNKSNIREDTHLFSPSSVTKGKASRAHRTGPATAGNSSPSFSRMAGTPEDWEQPLNANKVHSLAGVNNRKRPLPTESSSPPMAQWVGQRPQKISRNRRTNIVSPTSNHDETQMSSETCASDFSARIPGGMNGSLPVRTVASNSQQLKVKLENAPSPARLSESEENSTAENRLKDKSLGGSELDERSINGHQHVSPSGMFPKKSKLISKEDIGDGVRRQGRTGRGSSFSRGSMSPLREKLENAAATKPVRSTRPGSEKNGSKSGRPPLKKHSERKGFTRLGVVPNSSSPDFTGESDDDREDLVAAAQFACNASYNGCSSSFWKKMEPLFYAKLEDKSFLEEQLKSVEEHESKSGAIPLQGDNVVNRVLQIEHLQPESFAPGESNKCVLDNGSMESAKTGSLVNQFQDQDSSCSGLDAEKGLNSLTPLYQRVLSALIVEDEFEEIEDNSFGSSGGSLANRDDAFTAADRISCNGNANHTRFSSIQFPMHEEIEEGDYSFMHQVGQPGPGLVQSNANGPLSISTNTSGDSSIECQYDQMCMDEKLLIELQSVGLDAETVPDLAEGEDELINQDIGQLKKQLYQQAGKKRAYLDRLHKVLEERKEVEGRELEQLAMNRLTELAYRKLLATRGSSAARIGISKVSRHVALAFIRRTLARCRKFEDAGKSCFTEPALRDVLFAVPNNNAGAVNSTSQAEQNMRREARTSGSEQLDSQNDKSERGPFDAYEALSHQSDHAFAKNGPILNRGKKKEVLLDDVGGNASVRSTSNLGSNILGGAKGKRSERDSGAKAGRPSIGNLRGERKAKAKPKQKAAQMSTHPVQPSVSNELVASGSNRKREGLISPGNILDSSKESKDSMELGSNLPLHELDSIEDLGVTNEFEGHQDLSSWLNFDEVDGLLDHDSMGLEIPMDDLSELNMLL*

Click here to download the sequence:
Link to NCBI Protein BLAST