Transcript Information: R_Transcript_278709.p1


Annotated TAIR IDAT4G39530.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:18374736-18377240 | Reverse length=834
E-Value2E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.16745835738274
Replicate 20
Replicate 30.210153555928
Condition 2: 8 Hour
Replicate 10
Replicate 20.20514570496501
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.60702547405259
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_278709.p1 GENE.R_Transcript_278709~~R_Transcript_278709.p1 ORF type:internal len:109 (+),score=24.13,PPR|PF01535.16|4.3e-05,PPR|PF01535.16|1.6e-05,PPR|PF01535.16|5.6e+03,PPR_2|PF13041.2|0.00036,PPR_2|PF13041.2|1.1e-05,PPR_3|PF13812.2|0.005,PPR_3|PF13812.2|7.1e-05,PPR_1|PF12854.3|0.0009,PPR_1|PF12854.3|0.29 R_Transcript_278709:3-326(+)
TTGGTACAAGGTACCCAAGTGCATGGTATTGTTGTTAAGTGTGGCTTGAGTGATAATGTGTATGTGGGTACCGCTATGATTGATTTATATGCCAAAGTAGGTGATGTTGATGATGCGAGAGTGGTTTTTGATGAGCTCTTGGAGAAAAGTTTGTTTACTTGGACAACAATTATGACAGGATATGTTAGAAGTGGGAGAAGTGATGTTTCATTGATGTTGTTCTATGACATGATGAGGGATGCTTATGTTGTTCCTGATAAGTATGTTCTTTCTAGTGCATTAAGTGCATGCTCAGTGCTACGGTGTCTTGAAGGGGGAAAGCAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_278709.p1 GENE.R_Transcript_278709~~R_Transcript_278709.p1 ORF type:internal len:109 (+),score=24.13,PPR|PF01535.16|4.3e-05,PPR|PF01535.16|1.6e-05,PPR|PF01535.16|5.6e+03,PPR_2|PF13041.2|0.00036,PPR_2|PF13041.2|1.1e-05,PPR_3|PF13812.2|0.005,PPR_3|PF13812.2|7.1e-05,PPR_1|PF12854.3|0.0009,PPR_1|PF12854.3|0.29 R_Transcript_278709:3-326(+)
LVQGTQVHGIVVKCGLSDNVYVGTAMIDLYAKVGDVDDARVVFDELLEKSLFTWTTIMTGYVRSGRSDVSLMLFYDMMRDAYVVPDKYVLSSALSACSVLRCLEGGKQ

Click here to download the sequence:
Link to NCBI Protein BLAST