Transcript Information: R_Transcript_278845.p1


Annotated TAIR IDAT5G15780.1
Annotated Gene NamePollen Ole e 1 allergen and extensin family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:5144898-5146297 | Reverse length=401
E-Value6E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.26114801512808
Replicate 30
Condition 2: 8 Hour
Replicate 10.48728089447254
Replicate 20.27812042091027
Replicate 30
Condition 3: 24 Hour
Replicate 10.34265383921946
Replicate 20
Replicate 30.32668215950593


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_278845.p1 GENE.R_Transcript_278845~~R_Transcript_278845.p1 ORF type:internal len:402 (+),score=100.60,Collagen|PF01391.14|5.1e-09,Collagen|PF01391.14|9.4e-07,Collagen|PF01391.14|1.5e-06,Collagen|PF01391.14|1.6e+04,Collagen|PF01391.14|1.8e-08 R_Transcript_278845:2-1204(+)
AAAAACAACAAGCAAAAAAAAAACATGAAACTACTAATAATTTTAGTTATTCTTTTTTTCTTATGTTTTGCGTTGGACAGAGTAAGTTGTTCAGAAACACCTTTGACTTCAAGAGGTGGGAAAAAACATGACTCTGAATGCGACAAAGGCGTTAAGGGTGACAAAGGTGACAAAGGTGAGCAAGGAGCACCAGGTTGCCCAGGAACAAAGGGCGACCAAGGCTCAAAAGGTGACAACGGAGCAAACGGTGATTGTGGTGATCAAGGTTGCTCTGGAGAGTCAGGTCAGAAAGGAGACCAAGGAGCAAAGGGAGATCAAGGCCCAAACGGTTCTTCTGGTGCAAAGGGAGACCAAGGTCCAAACGGATGCCCTGGTGACAAGGGAGCAAATGGACAAAATGGTATGAACGGTTGCACTGGTGCTAACGGCTCCAATGGATCCAAAGGAGAAAAGGGAAGCCAAGGTGACCAAGGACTCCAAGGAGACAAAGGAAACAAGGGAGAGAAAGGAAATACTGGTGACCAAGGTCCTAATGGAATGAACGGATGCAAAGGAGATAAGGGTAACCAAGGACAAAAAGGTAACAATGGAGCAAATGGATGTCCTGGAGACAAGGGAGCTCAAGGAACACCTGGGGCACCAGGATCTAACGGAACCAACGGATGCAACGGAGACAAAGGAGCACAAGGCCCTAAAGGAGATAATGGAATGAATGGATGCAACGGAGAGAAGGGAGCACAAGGTCCAAAAGGAGACTCTGGAATGAATGGATGTCCTGGGTCCAACGGAGCAAAGGGAGACCAAGGAACAAAAGGAGCTAACGGAGCTAACGGAAGCAATGGAGCAAAGGGAGACCAAGGATCAAAGGGAGCTAACGGAGCTAATGGAACCAACGGATCCAAGGGAGCAAACGGAGAAAAGGGAGCTAATGGAGAGAACGGAGCTAATGGTTGTAACGGAGAAAAAGGTAACAAGGGAGCAACTGGAGAAAATGGATGCAACGGTACTAACGGAGCAAAGGGAGCAAACGGAGAAAACGGATGTAAAGGAGCATCTGGAGCAAAGGGAGCAACTGGAACAAATGGAAGCAATGGAGCAAATGGAGCAAAGGGAGAACAAGGTCCTAATGGTTGCAATGGAGCAAAGGGAGCATCTGGAGAAAAGGGTAACAAGGGAGCAAACGGAGCAAACGGATGCAATGGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_278845.p1 GENE.R_Transcript_278845~~R_Transcript_278845.p1 ORF type:internal len:402 (+),score=100.60,Collagen|PF01391.14|5.1e-09,Collagen|PF01391.14|9.4e-07,Collagen|PF01391.14|1.5e-06,Collagen|PF01391.14|1.6e+04,Collagen|PF01391.14|1.8e-08 R_Transcript_278845:2-1204(+)
KNNKQKKNMKLLIILVILFFLCFALDRVSCSETPLTSRGGKKHDSECDKGVKGDKGDKGEQGAPGCPGTKGDQGSKGDNGANGDCGDQGCSGESGQKGDQGAKGDQGPNGSSGAKGDQGPNGCPGDKGANGQNGMNGCTGANGSNGSKGEKGSQGDQGLQGDKGNKGEKGNTGDQGPNGMNGCKGDKGNQGQKGNNGANGCPGDKGAQGTPGAPGSNGTNGCNGDKGAQGPKGDNGMNGCNGEKGAQGPKGDSGMNGCPGSNGAKGDQGTKGANGANGSNGAKGDQGSKGANGANGTNGSKGANGEKGANGENGANGCNGEKGNKGATGENGCNGTNGAKGANGENGCKGASGAKGATGTNGSNGANGAKGEQGPNGCNGAKGASGEKGNKGANGANGCNG

Click here to download the sequence:
Link to NCBI Protein BLAST