Transcript Information: R_Transcript_278850.p1


Annotated TAIR IDAT5G66500.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:26548076-26549674 | Reverse length=532
E-Value1E-121
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.22044638834201
Replicate 20.40572561190914
Replicate 30
Condition 2: 8 Hour
Replicate 10.059144601321848
Replicate 20.32407075132153
Replicate 30.26306682058532
Condition 3: 24 Hour
Replicate 10.33272184387977
Replicate 20.10654714439892
Replicate 30.052868851900718


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_278850.p1 GENE.R_Transcript_278850~~R_Transcript_278850.p1 ORF type:5prime_partial len:414 (+),score=75.70,PPR_2|PF13041.2|0.063,PPR_2|PF13041.2|1.4e-10,PPR_2|PF13041.2|1.8,PPR_2|PF13041.2|0.0088,PPR_2|PF13041.2|0.017,PPR_2|PF13041.2|7.1e-08,PPR_2|PF13041.2|1e-07,PPR|PF01535.16|0.00032,PPR|PF01535.16|2.1e-06,PPR|PF01535.16|1.6e+04,PPR|PF01535.16|1.6,PPR|PF01535.16|0.021,PPR|PF01535.16|5e+03,PPR|PF01535.16|0.0013,PPR|PF01535.16|1.6e-07,PPR|PF01535.16|3.7,PPR|PF01535.16|0.0025,PPR|PF01535.16|81,PPR_3|PF13812.2|3.3,PPR_3|PF13812.2|0.0013,PPR_3|PF13812.2|6.8e+03,PPR_3|PF13812.2|1.7e+03,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|1.7e+03,PPR_3|PF13812.2|5.9,PPR_3|PF13812.2|1.7,PPR_3|PF13812.2|13,PPR_3|PF13812.2|0.0017,PPR_3|PF13812.2|1.1e+02,PPR_1|PF12854.3|0.08,PPR_1|PF12854.3|0.046,PPR_1|PF12854.3|27,PPR_1|PF12854.3|9,PPR_1|PF12854.3|1.3,PPR_1|PF12854.3|0.00029,PPR_1|PF12854.3|1.3e+03,PPR_1|PF12854.3|0.13,PPR_1|PF12854.3|34 R_Transcript_278850:2-1243(+)
TTAACTAATTCAAGACGAGGTATTCAAGTTCATGCCCTTATGATCAAAGCAGGTTCAGATATCGAAACTGTCCCAAAAACTGCTCTTATGGACATGTATTCCAAGTATGGTTTAGTGGATGAGTCGGTTCGAGTGTTTGACGAGATGGGATCTAAGGATGTGGTCACTTGGAATGCTTTGCTTTCGAATTTTCTGCGAAATGACAAGCCTAGGAAAGCACTGGATGTTTTCGGGAAGATGAGGAAGGAAAGGGTTGAATTTACTGAGTTTACTATCTGTTCTTTGCTTAAAGTTTGCTCCTTGTTGAAGGCGATGAGGCAGGGTATGCAAGTTCATGGCTTGGTTGTGACTATGGGCCGTGATAAGGTGGTTTTGGCGACTGCCCTTATTGACTTTTACTCAGATGTTGGACTGATTGACAAAGCTATGAAGATTTATTGGAGTTTAGATTGCCGAAAAGATAATGTTCTTCACAATTCCTTCATTGCTGCGTGTGTTAAGAATCAGAAGTATAAGGAAGCATTCTTGTTGATGAGTAGAATGAAGCCTAATATTGTGGCCTTAACTAGTGCTTTGACAGCTTGCTCCAAGAAATCAGATCTGCGGACCGGGAAGCAGATACATGGCGTGGCTATTCGAATTTGGCTGACAGATGATACTCAGTTGAGTAACGCTTTGCTAGACATGTACTCGAAATGTGGGAAGGTCTCATTGGCCCTTTCAGTTTTTGATGGAATGCCTCACAGAGATGTGGTCTCTTGGACTAGCATGATAGATTCATATGGAAGCCATGGTAAAGGGTATGAAGCAGTTGAGCTTTTTACCAAAATGGAAGAAGATGTGAGCAGTGTAATGCCCAATGATGTGACTCTCCTCGCAGTTCTGTCTGCCTGCTCTCATTCAGGATTAGTTGATAGAGGCCGAGAATGTTTTAGTTCTATTGAGGGGAAATACGGTTTGTTTCCAAACTCATCTCACTATGCTTGCTTTATCGACATCTTAGGACGAGCAGGGCATATCAATGAAGTTTGGTGTTTGTATGATGAGATGATTAAGAAAGGCATTAAGCCCACAGCTGCAGTGTGGGCAGCATTGCTTAATGCTTGTGGACAGAACAATGATGTCTCAAGGGGCGAGTTTGCTGCAAAACAGCTTTCTGAGTTGGAGCCTGATAAACCTGGGATTTATGTTTATCAAATTTCTACGCAGCTATTGGGAAGTGGGATATTGTTGACCAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_278850.p1 GENE.R_Transcript_278850~~R_Transcript_278850.p1 ORF type:5prime_partial len:414 (+),score=75.70,PPR_2|PF13041.2|0.063,PPR_2|PF13041.2|1.4e-10,PPR_2|PF13041.2|1.8,PPR_2|PF13041.2|0.0088,PPR_2|PF13041.2|0.017,PPR_2|PF13041.2|7.1e-08,PPR_2|PF13041.2|1e-07,PPR|PF01535.16|0.00032,PPR|PF01535.16|2.1e-06,PPR|PF01535.16|1.6e+04,PPR|PF01535.16|1.6,PPR|PF01535.16|0.021,PPR|PF01535.16|5e+03,PPR|PF01535.16|0.0013,PPR|PF01535.16|1.6e-07,PPR|PF01535.16|3.7,PPR|PF01535.16|0.0025,PPR|PF01535.16|81,PPR_3|PF13812.2|3.3,PPR_3|PF13812.2|0.0013,PPR_3|PF13812.2|6.8e+03,PPR_3|PF13812.2|1.7e+03,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|1.7e+03,PPR_3|PF13812.2|5.9,PPR_3|PF13812.2|1.7,PPR_3|PF13812.2|13,PPR_3|PF13812.2|0.0017,PPR_3|PF13812.2|1.1e+02,PPR_1|PF12854.3|0.08,PPR_1|PF12854.3|0.046,PPR_1|PF12854.3|27,PPR_1|PF12854.3|9,PPR_1|PF12854.3|1.3,PPR_1|PF12854.3|0.00029,PPR_1|PF12854.3|1.3e+03,PPR_1|PF12854.3|0.13,PPR_1|PF12854.3|34 R_Transcript_278850:2-1243(+)
LTNSRRGIQVHALMIKAGSDIETVPKTALMDMYSKYGLVDESVRVFDEMGSKDVVTWNALLSNFLRNDKPRKALDVFGKMRKERVEFTEFTICSLLKVCSLLKAMRQGMQVHGLVVTMGRDKVVLATALIDFYSDVGLIDKAMKIYWSLDCRKDNVLHNSFIAACVKNQKYKEAFLLMSRMKPNIVALTSALTACSKKSDLRTGKQIHGVAIRIWLTDDTQLSNALLDMYSKCGKVSLALSVFDGMPHRDVVSWTSMIDSYGSHGKGYEAVELFTKMEEDVSSVMPNDVTLLAVLSACSHSGLVDRGRECFSSIEGKYGLFPNSSHYACFIDILGRAGHINEVWCLYDEMIKKGIKPTAAVWAALLNACGQNNDVSRGEFAAKQLSELEPDKPGIYVYQISTQLLGSGILLTN*

Click here to download the sequence:
Link to NCBI Protein BLAST