Transcript Information: R_Transcript_278887.p1


Annotated TAIR IDAT5G05720.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:1716871-1719541 | Forward length=451
E-Value8.4E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2008526943894
Replicate 20.89786810990748
Replicate 30.82886221565025
Condition 2: 8 Hour
Replicate 11.2887297340655
Replicate 20.95622192084017
Replicate 31.6718588729304
Condition 3: 24 Hour
Replicate 11.9634966707905
Replicate 20.79805213090905
Replicate 31.4399805715064


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_278887.p1 GENE.R_Transcript_278887~~R_Transcript_278887.p1 ORF type:internal len:304 (+),score=84.39,RRM_1|PF00076.18|0.00021,RRM_1|PF00076.18|4.6e-09,RRM_6|PF14259.2|0.04,RRM_6|PF14259.2|8.8e-05,RRM_5|PF13893.2|0.012,RRM_5|PF13893.2|0.54,RRM_u2|PF16651.1|3.8e-06 R_Transcript_278887:3-911(+)
TCTCTCATTCGCACCAGAGATGGCAAGAGCAGGCAGTTTGCGTTTGTCGGGTACCGGACCGAGCAAGAAGCAGAAGAGGCTATTAGATACTTCAACAAGTCGTTTTTGGACACCTCCAGAATTAGTTGTGAGTTTGCTCTGAAACAAGGGGATCCAAATATTCCCTGTCCTCAGAGGTGGTATTCTAAGAAGAAAGAAGAGAAGACTCAAAGGCGAAACCAGAACCAAGTTTCTGAGAGCAAATATAAAACTGAGAAGAGTGCAAACATAAGTAAAGAGAATGATGATCCCAAATGTGTAGAGTTTTTTCAAGTTATGCAGCCACGAAGCAAATCAAAGTTGTGGGAAAATGATCTAGTAGTTCCTACTCTTGAGCATATAACTGCAGGCAGTGAGGAGTCCATTCAGTTACAGCAAGAAGGAAAGGGGTCAATGAAAAAGCTTAACACAGCTAAGACTGCTCAGGATGATGGAATGCATGATGAAAACACTGACAGACCACTTAAACTTGCCCATGATTTAGAAGTCCCAGACATGGAATACTTTAAACATCGAGTTAAAAAGGAATGGTCTGATTCAGAAAGTGATGGTGATAATGAAAATGGAATTGATATGGATCAGCATGATGATGATAACAGTGGTCCAAAGGGTAATCAAAAAGAGCTGGGTGCTCAGAATTTCACTGCTTCTGTGGGACAGAACACTCTAAAAGGCATTGGTGTGTTTGAAGAACCTGGTGGTGAATTTGTGAGCTCTGGAAAGCTCTCTAGTCCACAAGATGCAAATGAAGTGCTTCAGAGTCGGCTTTTTGTCAGCAATCTTCCCTATGCTGCAACTGAGGATGAGCTGGCAGATCTCTTCAGCAAATTTGGGAACATAGCAAATGTCCATCTTGTCATTGATAAAGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_278887.p1 GENE.R_Transcript_278887~~R_Transcript_278887.p1 ORF type:internal len:304 (+),score=84.39,RRM_1|PF00076.18|0.00021,RRM_1|PF00076.18|4.6e-09,RRM_6|PF14259.2|0.04,RRM_6|PF14259.2|8.8e-05,RRM_5|PF13893.2|0.012,RRM_5|PF13893.2|0.54,RRM_u2|PF16651.1|3.8e-06 R_Transcript_278887:3-911(+)
SLIRTRDGKSRQFAFVGYRTEQEAEEAIRYFNKSFLDTSRISCEFALKQGDPNIPCPQRWYSKKKEEKTQRRNQNQVSESKYKTEKSANISKENDDPKCVEFFQVMQPRSKSKLWENDLVVPTLEHITAGSEESIQLQQEGKGSMKKLNTAKTAQDDGMHDENTDRPLKLAHDLEVPDMEYFKHRVKKEWSDSESDGDNENGIDMDQHDDDNSGPKGNQKELGAQNFTASVGQNTLKGIGVFEEPGGEFVSSGKLSSPQDANEVLQSRLFVSNLPYAATEDELADLFSKFGNIANVHLVIDKE

Click here to download the sequence:
Link to NCBI Protein BLAST