Transcript Information: R_Transcript_27913.p1


Annotated TAIR IDAT5G17230.3
Annotated Gene NamePHYTOENE SYNTHASE
Annotated Gene Symbol(s)PSY
Annotation TypeHomolog
Chromosome Positionchr5:5659839-5662087 | Reverse length=437
E-Value1E-46
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.5004056102354
Replicate 21.8215968397702
Replicate 31.5689546298735
Condition 2: 8 Hour
Replicate 13.5778432799628
Replicate 26.9431048639298
Replicate 38.0397544756965
Condition 3: 24 Hour
Replicate 12.8304145897169
Replicate 23.5248130647041
Replicate 33.4980349956229


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_27913.p1 GENE.R_Transcript_27913~~R_Transcript_27913.p1 ORF type:complete len:219 (+),score=30.14,SQS_PSY|PF00494.15|2.1e-26 R_Transcript_27913:487-1143(+)
ATGGGTCTGTTTGTCTTGCAGGTGCCAAATCCAGTAACTGATGTCAGTAACCTGCATGTTAAGTTGTTATTTTCCATGAAAAGATCCAAGTTCAGTGTAACCAATGCAAGAACAAAACTAGTATCATGTACACCTACCTCTGTGGTTTTGTCAAAAACGGGGAATGGTCCATCTCCATTACTTGATTTACATGTTCAGCAAGCAATTGAGAAGCAGTCCAAAGATGCAATGACTCTAAGAAAAGGCTATCAGTTAGATCCTTATTTTCTTGGGGAGGCCTATGAACGGTGTCGCAAAATATGCGCCGAATATGCCAAGACTTTCTATTTAGGAACTTTACTTATGACGGAGGAAAGAAAGAGAGCAATATGGGCTCTCTATGTTTGGTGTCGTAGAACGGATGAGCTAGTGGATGGTCCAAATGCTCAACTAACTAGCTCCACTGTGCTGGATAGTTGGGAAGAGAGACTTGATAACATCTTCAATGGATGCCCTTATGACATGCTTGATTCTGCCTTGCTAGATACTATTCAAACATTTCACCTAGACATTAAGCCATTCAGAGATATGATCGAAGGGATGAGAATGGATATGTGGAAAGACCGCTATGACAGCTTTGAAGAGCTACGCCGTTACTGCTTTTATGTGGTATCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_27913.p1 GENE.R_Transcript_27913~~R_Transcript_27913.p1 ORF type:complete len:219 (+),score=30.14,SQS_PSY|PF00494.15|2.1e-26 R_Transcript_27913:487-1143(+)
MGLFVLQVPNPVTDVSNLHVKLLFSMKRSKFSVTNARTKLVSCTPTSVVLSKTGNGPSPLLDLHVQQAIEKQSKDAMTLRKGYQLDPYFLGEAYERCRKICAEYAKTFYLGTLLMTEERKRAIWALYVWCRRTDELVDGPNAQLTSSTVLDSWEERLDNIFNGCPYDMLDSALLDTIQTFHLDIKPFRDMIEGMRMDMWKDRYDSFEELRRYCFYVVS*

Click here to download the sequence:
Link to NCBI Protein BLAST