Transcript Information: R_Transcript_27914.p2


Annotated TAIR IDAT5G17230.3
Annotated Gene NamePHYTOENE SYNTHASE
Annotated Gene Symbol(s)PSY
Annotation TypeOrtholog
Chromosome Positionchr5:5659839-5662087 | Reverse length=437
E-Value8E-91
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8349537467707
Replicate 22.3329222684776
Replicate 32.0603943869555
Condition 2: 8 Hour
Replicate 13.7570903887307
Replicate 26.1522002949294
Replicate 37.1069798196224
Condition 3: 24 Hour
Replicate 13.2796867468149
Replicate 23.267445761567
Replicate 32.3161592261267


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_27914.p2 GENE.R_Transcript_27914~~R_Transcript_27914.p2 ORF type:complete len:189 (+),score=34.06,SQS_PSY|PF00494.15|4e-49 R_Transcript_27914:1316-1882(+)
ATGATCGAAGGGATGAGAATGGATATGTGGAAAGACCGCTATGACAGCTTTGAAGAGCTACGCCGTTACTGCTTTTATGTGGCTGGCACGGTTGGGCTAATGACTGTCCCAATTTTGGGCATTTCTCCTGAATCTCTAACTGACACCGAAAGCATCTATAATGCTGCCATTTGCTTGGGAATTGGAAATCAACTAACAAACATCCTTAGAGATGTAGGAGAAGATGCTTTGAGAGGGAGAATTTATCTTCCTCAAGATGACCTCAGAGAGTTCGGATTGAAGGATGATGATATATTCTCGAGGAAGATCACAGAAGAATGGAAGGAATTCATGAAGAAGCAGATAGCAAGGGCAAGAACCTACTTTAGTGAAGCAGAACAAGGTGCTTTTCAGTTAGACAAGGCTAGTAGGTGGCCGGTATGTTCATCTTTAATGTTATATCAAAAGATCTTGGAGGAGATAGAGAACAACAATTATGATAACTTCACAAAGCGAGCATATGTTGGGAGGGCTAAGAAGCTTCTAACATTGCCAGTAGCTTATGCCAAAGCCGTCGGCTGGAGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_27914.p2 GENE.R_Transcript_27914~~R_Transcript_27914.p2 ORF type:complete len:189 (+),score=34.06,SQS_PSY|PF00494.15|4e-49 R_Transcript_27914:1316-1882(+)
MIEGMRMDMWKDRYDSFEELRRYCFYVAGTVGLMTVPILGISPESLTDTESIYNAAICLGIGNQLTNILRDVGEDALRGRIYLPQDDLREFGLKDDDIFSRKITEEWKEFMKKQIARARTYFSEAEQGAFQLDKASRWPVCSSLMLYQKILEEIENNNYDNFTKRAYVGRAKKLLTLPVAYAKAVGWS*

Click here to download the sequence:
Link to NCBI Protein BLAST