Transcript Information: R_Transcript_27917.p1


Annotated TAIR IDAT5G17230.3
Annotated Gene NamePHYTOENE SYNTHASE
Annotated Gene Symbol(s)PSY
Annotation TypeOrtholog
Chromosome Positionchr5:5659839-5662087 | Reverse length=437
E-Value2.2E-48
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.7099514135607
Replicate 23.7554358468175
Replicate 33.352205501876
Condition 2: 8 Hour
Replicate 19.356387418866
Replicate 214.543662986137
Replicate 311.658351536671
Condition 3: 24 Hour
Replicate 16.9060070522362
Replicate 26.8138198198532
Replicate 37.4738503808918


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_27917.p1 GENE.R_Transcript_27917~~R_Transcript_27917.p1 ORF type:5prime_partial len:123 (+),score=28.22,SQS_PSY|PF00494.15|7.5e-21 R_Transcript_27917:2-370(+)
GCTTTGAGAGGGAGAATTTATCTTCCTCAAGATGACCTCAGAGAGTTCGGATTGAAGGATGATGATATATTCTCGAGGAAGATCACAGAAGAATGGAAGGAATTCATGAAGAAGCAGATAGCAAGGGCAAGAACCTACTTTAGTGAAGCAGAACAAGGTGCTTTTCAGTTAGACAAGGCTAGTAGGTGGCCGGTATGTTCATCTTTAATGTTATATCAAAAGATCTTGGAGGAGATAGAGAACAACAATTATGATAACTTCACAAAGCGAGCATATGTTGGGAGGGCTAAGAAGCTTCTAACATTGCCAGTAGCTTATGCCAAAGCCATCGGCCAGCACCAACCTCAGCTAACATCAGCAAGGAAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_27917.p1 GENE.R_Transcript_27917~~R_Transcript_27917.p1 ORF type:5prime_partial len:123 (+),score=28.22,SQS_PSY|PF00494.15|7.5e-21 R_Transcript_27917:2-370(+)
ALRGRIYLPQDDLREFGLKDDDIFSRKITEEWKEFMKKQIARARTYFSEAEQGAFQLDKASRWPVCSSLMLYQKILEEIENNNYDNFTKRAYVGRAKKLLTLPVAYAKAIGQHQPQLTSARK*

Click here to download the sequence:
Link to NCBI Protein BLAST