Transcript Information: R_Transcript_279419.p1


Annotated TAIR IDAT5G57480.1
Annotated Gene NameP-loop containing nucleoside triphosphate hydrolases superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:23279406-23280968 | Reverse length=520
E-Value3E-42
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.9026988162026
Replicate 26.685389187279
Replicate 36.951795986892
Condition 2: 8 Hour
Replicate 12.8018651432171
Replicate 23.4486932192873
Replicate 32.3479695329854
Condition 3: 24 Hour
Replicate 15.2540255346985
Replicate 29.3268507746222
Replicate 37.949265881311


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_279419.p1 GENE.R_Transcript_279419~~R_Transcript_279419.p1 ORF type:5prime_partial len:201 (-),score=50.72 R_Transcript_279419:47-649(-)
TCTGTCGGGCCAGCGGACGGGGACGGTCCGGGCTCATCGGTGACCCTTTCGGGCCTGCTGGGGTTCACCGACGGGCTGTGGTCGTGCTGTGGGAGTGAGAGGATATTTGTATTTACGACGAACCACGTGGAGAGGTTGGATCCGGCATTGTTGAGGAGTGGCAGGATGGACATGCATATCCATATGAGCTACTGTTCTTTTGCGGCGTTGAAAATTTTATTGAAAAATTATGTGGGAATTGAGAATGAGGATGATTTAGGGGAGGAAATGAGGGAGGAGTTCAAGGAGGTGGTGGAGAAAGCGAGGATGACGCCGGCTGACGTCAGCGAGGTGTTGATTCGACGGAGGAGAGAGAAAATGGCGGCGGTGGTTGAGTTGTTGGAGGTGATGAAGAAAAGGGGTGGAAGTAATTGTGAGGAGAAATTGAGTTCTCAAGAGGAAGAGGAGGAGCAAGAAAAGAGAGAGTTAGAAACGCACAACGGCGGTGGTTTTGACGGCGGTTTTGGCGGTGGTGGTGACATTGGGAAAATTGAGAAAGAGGGTGATATTGGGTTTGATATTTCTAAAGAATGTGATGATGATGGTAATAAGAAGTACAATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_279419.p1 GENE.R_Transcript_279419~~R_Transcript_279419.p1 ORF type:5prime_partial len:201 (-),score=50.72 R_Transcript_279419:47-649(-)
SVGPADGDGPGSSVTLSGLLGFTDGLWSCCGSERIFVFTTNHVERLDPALLRSGRMDMHIHMSYCSFAALKILLKNYVGIENEDDLGEEMREEFKEVVEKARMTPADVSEVLIRRRREKMAAVVELLEVMKKRGGSNCEEKLSSQEEEEEQEKRELETHNGGGFDGGFGGGGDIGKIEKEGDIGFDISKECDDDGNKKYN*

Click here to download the sequence:
Link to NCBI Protein BLAST