Transcript Information: R_Transcript_27957.p1


Annotated TAIR IDAT5G42660.1
Annotated Gene NameProtein of unknown function (DUF616)
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:17103062-17105785 | Reverse length=463
E-Value2.1E-218
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.581426640417
Replicate 25.5642369633254
Replicate 39.6274694244699
Condition 2: 8 Hour
Replicate 16.4890076878828
Replicate 27.3147398155431
Replicate 310.334767951566
Condition 3: 24 Hour
Replicate 111.645264535792
Replicate 28.5389925725423
Replicate 39.289812548269


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_27957.p1 GENE.R_Transcript_27957~~R_Transcript_27957.p1 ORF type:complete len:483 (+),score=72.71,DUF616|PF04765.9|8.1e-119 R_Transcript_27957:114-1562(+)
ATGTACAACACTAACACCACCACCAACAACATCTCAATACCGCTTTCGGACGAAGATGCGGATGAATTCGCTGGCAGAATGAGAGTCAGAACTCGTAGAAAGCGCAAGAAATCATCAGCAGCTGCTTTCCGATCCAATAATGCCGAGTTAACTCGCCGTCTAGTGCGAAAACTCGCTAAGTGGTGGCCGCTCTTGCTTTTCCTTCCTGCTCTTGCTTTGGTTCTCTTTGAAGCTTCTCAACTCGCTGGTGGTTCTGGTAACAAGGCCCCACCCAGTCATGAATCGTTCACCCGGTCGAGGCCCGGTTTTTTTGTGGAGAAGAAGAAATCTAATGATAACCTGAACCGTTTGAATCCTACTTATCACACTGTCGCCGGTGTCAAACAACGCTGCTTGAAGCTCGTATCTACAGAAGAACTTGAGAATTTGGATGTACCTATGCTAAAAGAGTCAACTGGCCCTGTTAAGAATGTGGTGTATATATCAGAATACAATAACCCTAATTTAGTGGATAATTCTACACTCTTGCGACAGCTCAGGGAAGCTGGAAGATTTAACTTATTTACAGGATACCAGACACTTGATCAGAGGGATAAAAGCTTCAAGGTGACTGAAAAGCCTATGGTGCATTGTGGTTTCTACAGTGAAAATGGTGGATTTAAGATTTCAGATGAGGATAAAAAATTTATGCAAACTTGCAAGGTCGTGGTGTCTACATGTGCATTTGGTGGTGGAGACGATCTTTATCAGCCTATTGGAATGTCAACGGCATCACTTCAAAAGGTCTGCTATGTGGCATTTTGGGATGAAATCACCCTTAGTATGCAGGAAACTCAGGGACACAAAATTGATAATAATCATCATATTGGAAAATGGCGGATTGTTATTGTGAAGAAGCTCCCTTTCTCAGACCAGCGACTGAATGGTAAAGTTCCTAAGATGTTAGCCCATCGCCTGTTTCCTAATGCGCGGTATTCTATCTGGGTTGATTCAAAGTCTCAGTTTAGGAGGGATCCCTTGGGTGTACTAGAAGCTTTGCTTTGGCGCTCAAATTCTGTGCTTGCAATTTCACAGCATGGTGCCCGTAGTAGTGTCTACGATGAAGCTAAAGCTGTTGTTAAGAAAAACAAAGCCACACCAGAGGAGGTCGAGGTTCAAATAACTCAATATCGGCTTGATGGCCTTCCAGAGGACAAGAGATTTAATGGAAAGAAAGCTTTGAATGAAGCATCCATCATTGTTAGAGAGCACACATTTTTGACTAACCTGTTCATGTGCCTCTGGTTTAATGAAGTGGTTCGCTTTACGTCTCGGGATCAACTGAGCTTTCCCTATGTTCTCTGGCGGTTGAAATTGTTAACCGGTGTCAATATGTTTCCTGTTTGTACACGCAAAGACCTCGTAAATAGTATGGGTCACATACGTAAGGCTAAGCCACTTGAGATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_27957.p1 GENE.R_Transcript_27957~~R_Transcript_27957.p1 ORF type:complete len:483 (+),score=72.71,DUF616|PF04765.9|8.1e-119 R_Transcript_27957:114-1562(+)
MYNTNTTTNNISIPLSDEDADEFAGRMRVRTRRKRKKSSAAAFRSNNAELTRRLVRKLAKWWPLLLFLPALALVLFEASQLAGGSGNKAPPSHESFTRSRPGFFVEKKKSNDNLNRLNPTYHTVAGVKQRCLKLVSTEELENLDVPMLKESTGPVKNVVYISEYNNPNLVDNSTLLRQLREAGRFNLFTGYQTLDQRDKSFKVTEKPMVHCGFYSENGGFKISDEDKKFMQTCKVVVSTCAFGGGDDLYQPIGMSTASLQKVCYVAFWDEITLSMQETQGHKIDNNHHIGKWRIVIVKKLPFSDQRLNGKVPKMLAHRLFPNARYSIWVDSKSQFRRDPLGVLEALLWRSNSVLAISQHGARSSVYDEAKAVVKKNKATPEEVEVQITQYRLDGLPEDKRFNGKKALNEASIIVREHTFLTNLFMCLWFNEVVRFTSRDQLSFPYVLWRLKLLTGVNMFPVCTRKDLVNSMGHIRKAKPLEI*

Click here to download the sequence:
Link to NCBI Protein BLAST