Transcript Information: R_Transcript_279631.p1


Annotated TAIR IDAT1G66620.1
Annotated Gene NameProtein with RING/U-box and TRAF-like domains
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:24852806-24854044 | Reverse length=313
E-Value8.7E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0394369781809
Replicate 22.2286575860875
Replicate 32.175500218629
Condition 2: 8 Hour
Replicate 11.5047179576519
Replicate 23.2479493177141
Replicate 33.3463863154903
Condition 3: 24 Hour
Replicate 12.8216299386005
Replicate 22.5874884731962
Replicate 32.3232759164863


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_279631.p1 GENE.R_Transcript_279631~~R_Transcript_279631.p1 ORF type:5prime_partial len:179 (+),score=80.55 R_Transcript_279631:1-537(+)
CTTTTGCTTGTCAAGGAGAAGATGCGGGCTCTTGTAAATGTTCCTCAATATCCAAAGAGGCGCTCTCAAAGGAGTGATGATGAAACAGAAGAAGCTGGTGGCCAGTCAGACCTTTTGCTTGTCAAGGAGAAGATGCGGGCTCTTGTAAATGTTCCTCAATATCCAAAGAGGCGCTCTCAAAGGAGTGATGATGAAACAGAAGAAGCTGGTGGCCAGTCTGAGCAAATGAGTGAGGACGAAAAAGAGGAATGGTCTGATTATTATAAGGATATCGGTAATGAGTTCGATGAGGAAGAAAAAGAAGATGACGATGATGATGATGATGATGATGATGATGATGAGGAGGACGATGACGATGAGGATGAGGATGAGGATATTTGGACTGAAGATGATGAAATGCCCCCGGATTTTGCTGATGGCAGTGACAGTGTAAGAGTTGGTTTAAGCAAGCCAGTTGAGCAGTTTGATGTCCTACCAACAGATGCAGAGGAACGTGTTCCCGTATTTCCAGATGGCCGGCTAAGAGAACGCTGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_279631.p1 GENE.R_Transcript_279631~~R_Transcript_279631.p1 ORF type:5prime_partial len:179 (+),score=80.55 R_Transcript_279631:1-537(+)
LLLVKEKMRALVNVPQYPKRRSQRSDDETEEAGGQSDLLLVKEKMRALVNVPQYPKRRSQRSDDETEEAGGQSEQMSEDEKEEWSDYYKDIGNEFDEEEKEDDDDDDDDDDDDEEDDDDEDEDEDIWTEDDEMPPDFADGSDSVRVGLSKPVEQFDVLPTDAEERVPVFPDGRLRERW*

Click here to download the sequence:
Link to NCBI Protein BLAST