Transcript Information: R_Transcript_27973.p1


Annotated TAIR IDAT4G04720.1
Annotated Gene Namecalcium-dependent protein kinase 21
Annotated Gene Symbol(s)CPK21
Annotation TypeOrtholog
Chromosome Positionchr4:2394817-2397631 | Reverse length=531
E-Value1.1E-186
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1113.15642787942
Replicate 2107.93196259751
Replicate 3114.30911212198
Condition 2: 8 Hour
Replicate 186.900814812772
Replicate 293.024191450422
Replicate 3113.83313980563
Condition 3: 24 Hour
Replicate 1122.21656200631
Replicate 2117.84427544475
Replicate 3107.86489760732


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_27973.p1 GENE.R_Transcript_27973~~R_Transcript_27973.p1 ORF type:5prime_partial len:306 (+),score=75.08,EF-hand_1|PF00036.28|2.2e-07,EF-hand_1|PF00036.28|3.3e-05,EF-hand_1|PF00036.28|2e-07,EF-hand_1|PF00036.28|3.7e-08,Pkinase|PF00069.21|1.2e-29,EF-hand_7|PF13499.2|8.6e-14,EF-hand_7|PF13499.2|6e-12,EF-hand_6|PF13405.2|4.4e-05,EF-hand_6|PF13405.2|0.065,EF-hand_6|PF13405.2|2.5e-07,EF-hand_6|PF13405.2|0.00093,EF-hand_5|PF13202.2|8.7e-05,EF-hand_5|PF13202.2|0.041,EF-hand_5|PF13202.2|1.7e-05,EF-hand_5|PF13202.2|0.0073,EF-hand_8|PF13833.2|0.015,EF-hand_8|PF13833.2|1.9e-08,EF-hand_8|PF13833.2|2.3e-11,EF-hand_4|PF12763.3|0.19,EF-hand_4|PF12763.3|0.00045,SPARC_Ca_bdg|PF10591.5|0.069,SPARC_Ca_bdg|PF10591.5|0.0012,Pkinase_Tyr|PF07714.13|2.4e-06,EF-hand_9|PF14658.2|0.8,EF-hand_9|PF14658.2|0.011 R_Transcript_27973:2-919(+)
ACTGATTTTGGCCTTTCTGTCTTCATTGAGGAAGGCAAAGTATACCGCGATATAGTAGGCAGTGCTTACTATGTTGCTCCTGAGGTATTACGTCGTAGGTATGGGAAGGAGATTGATGTTTGGAGTGCTGGAGTCATGTTGTATATCTTACTCAGTGGTGTGCCTCCCTTCTGGGCAGAAACGGAGAAGGGGATTTTTGATGCTATCTTGCAAGGACACATTGACTTTGAAAGCAAACCTTGGCCTTCAATCTCACATGGTGCCAAGGACCTCGTGATGAAAATGCTTACACAGGATCCTAAGAAACGAATTACTGCTGCTCAAGTTCTCGAGCACCCATGGCTGAGAGAAGGTGAAGCATCAGACAAGCCAATAGATAGTGCTGTTCTCTCCAGGATGAAGCAGTTCAGAGTCATGAACAAGCTCAAGAAGCTGGCTCTGAAGGTCATTGCTGAAAACCTTCCTGAGGAAGAGATCCAAGGACTGAAGCAAATGTTTGCAAACATGGACACCGATGGTAGTGGGTCAATCACCTATGAAGAATTGAAGGAGGGATTGGCTCGTCTTGGATCAAAGCTTACTGAAACTGAAGTAAAGGCGCTCATGGAAGCTGCTGATCAAGATGGAAGTGGAACAATAGACTACTATGAGTTTATCACAGCAACAATGCATAGGTACAGGTTAGAAAGAGATGAGCATCTTTACAAGGCATTCCAATACTTCGACAAAGACAACAGCGGGTTTATCACCACAGATGAACTAGAAACAGCAATGAAGGAGTATGGAATTGCTGACGAGAATAGCATTACAGAGATTCTAGCAGAAGTCGACACTGATAATGATGGAAGAATCAACTACGATGAATTTTGCGCGATGATGAGAAGTGGGACTCAAAACCCCAATGCCAAACTTTTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_27973.p1 GENE.R_Transcript_27973~~R_Transcript_27973.p1 ORF type:5prime_partial len:306 (+),score=75.08,EF-hand_1|PF00036.28|2.2e-07,EF-hand_1|PF00036.28|3.3e-05,EF-hand_1|PF00036.28|2e-07,EF-hand_1|PF00036.28|3.7e-08,Pkinase|PF00069.21|1.2e-29,EF-hand_7|PF13499.2|8.6e-14,EF-hand_7|PF13499.2|6e-12,EF-hand_6|PF13405.2|4.4e-05,EF-hand_6|PF13405.2|0.065,EF-hand_6|PF13405.2|2.5e-07,EF-hand_6|PF13405.2|0.00093,EF-hand_5|PF13202.2|8.7e-05,EF-hand_5|PF13202.2|0.041,EF-hand_5|PF13202.2|1.7e-05,EF-hand_5|PF13202.2|0.0073,EF-hand_8|PF13833.2|0.015,EF-hand_8|PF13833.2|1.9e-08,EF-hand_8|PF13833.2|2.3e-11,EF-hand_4|PF12763.3|0.19,EF-hand_4|PF12763.3|0.00045,SPARC_Ca_bdg|PF10591.5|0.069,SPARC_Ca_bdg|PF10591.5|0.0012,Pkinase_Tyr|PF07714.13|2.4e-06,EF-hand_9|PF14658.2|0.8,EF-hand_9|PF14658.2|0.011 R_Transcript_27973:2-919(+)
TDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRRYGKEIDVWSAGVMLYILLSGVPPFWAETEKGIFDAILQGHIDFESKPWPSISHGAKDLVMKMLTQDPKKRITAAQVLEHPWLREGEASDKPIDSAVLSRMKQFRVMNKLKKLALKVIAENLPEEEIQGLKQMFANMDTDGSGSITYEELKEGLARLGSKLTETEVKALMEAADQDGSGTIDYYEFITATMHRYRLERDEHLYKAFQYFDKDNSGFITTDELETAMKEYGIADENSITEILAEVDTDNDGRINYDEFCAMMRSGTQNPNAKLF*

Click here to download the sequence:
Link to NCBI Protein BLAST