Transcript Information: R_Transcript_279829.p1


Annotated TAIR IDAT5G33406.1
Annotated Gene NamehAT dimerisation domain-containing protein / transposase-related
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:12676126-12678403 | Reverse length=509
E-Value3.3E-74
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.60174596554018
Replicate 20.23072857600328
Replicate 30.37758358674976
Condition 2: 8 Hour
Replicate 11.2108394754132
Replicate 21.7200678339374
Replicate 31.3962777400298
Condition 3: 24 Hour
Replicate 10.37842539386326
Replicate 20.36354822347105
Replicate 31.0823590229784


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_279829.p1 GENE.R_Transcript_279829~~R_Transcript_279829.p1 ORF type:5prime_partial len:182 (-),score=32.29 R_Transcript_279829:200-745(-)
GTCACTTCTCAAGAATACAACAAAGACTGGATGAAAGATTCCGTTGGAAAAAAAGTGGCATCTTATCTTTTACAAGAGTCTTTTTGGAGAAATATTGTTTATGCTCTCAAATTGACGGGTCCTCTTGTTAAGGTTCTTAGAATGGTTGATGGAGATAAAAAGCCGGCCATGGGTTACATTTATGAGGCAATGGATAGGGCTAAGGAGGCAATTGCCAATAGCTTTAGGCAAAAAGAAGACCAATACAAGGGAACATTTGAGATTATTGATGCTAGATGGGATTGCCAACTCCATAAGCCTTTACATGCCGCCGGGTACTTCTTGAACCCCGAGATGTATTATGGAAATGAGATCGATGCAAGTTGTGAAGAAGTTATGCGAGGCTTATATGATTGTATCTCAAGGTTGGTACCGGATTTGGAAACTCAAGATAAGATTGAGCAAGAGTTGGATGTATACAAAAATGGTACTGGTCTTTTTGCTTTACCCATGGCAATAAGACATAGGAAGACAAAAGCTCCAGGTAAAAAGAAAAAATACCTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_279829.p1 GENE.R_Transcript_279829~~R_Transcript_279829.p1 ORF type:5prime_partial len:182 (-),score=32.29 R_Transcript_279829:200-745(-)
VTSQEYNKDWMKDSVGKKVASYLLQESFWRNIVYALKLTGPLVKVLRMVDGDKKPAMGYIYEAMDRAKEAIANSFRQKEDQYKGTFEIIDARWDCQLHKPLHAAGYFLNPEMYYGNEIDASCEEVMRGLYDCISRLVPDLETQDKIEQELDVYKNGTGLFALPMAIRHRKTKAPGKKKKYL*

Click here to download the sequence:
Link to NCBI Protein BLAST