Transcript Information: R_Transcript_27989.p1


Annotated TAIR IDAT5G61820.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Stress up-regulated Nod 19 (InterPro:IPR011692); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:24834505-24836223 | Reverse length=475
E-Value2.6E-177
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.6819277462308
Replicate 21.9824833011097
Replicate 32.5561166416307
Condition 2: 8 Hour
Replicate 19.3529698725529
Replicate 210.076792246028
Replicate 38.9589494478305
Condition 3: 24 Hour
Replicate 14.72950535163
Replicate 25.6321369269929
Replicate 33.0999753419211


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_27989.p1 GENE.R_Transcript_27989~~R_Transcript_27989.p1 ORF type:complete len:466 (+),score=58.56,SURNod19|PF07712.8|6.8e-186 R_Transcript_27989:226-1623(+)
ATGGCGAAGCCTAAGTCATCATTCTTATATTGGTTATGCATAGCCCTTGTATTGTCTGCTGAAATTACATGGGCTCGTACACAGCAACAAACCACAATGAAATCAGCTGCTTATTTATCAGCTCAATTTGTTATGGAACCTGGATCAGTAGCAAACAAATTCTACTACAATATCGACTTCCCAAAGGGCCACATAGGCTTAAAGAGTTTCAACGCTGAAGTAGTTGACGAATTTGGAGTGCCTGTCCCCCTTCACGACACTTACCTCCACCATTGGTTGGTTGTAAGATACTATTTACGTGTAGGTTTTGAAGATAAGGGGCTTGGTAGCCATCCTGAACTTCACCACCGGTCAGATTTTCTACTAGTAGGAAACAGTGGATTGTGCGACAAGCATACTCTAGGGCAGTATTTTGGATTGGGATCTGAAACCCGAAAAACTGCCACATATGTACCGGATCCTTATGCAATTGAAGTTGGGAATTCAGACGAAGTACCACCAGGGTATGAGGAGAGATGGCTTCTTAATGTTCATGCGATTGATACTCGAGGTGTGGTGGATAGGTTGGGATGCACAGAGTGCAGGTGTGATCTCTACAATGTTACTGTCGATGAATATGGCAGACCCTTGAGCCCTGATTATGAAGGTGGCCTGTATTGTTGCTACGATCAAACACAATGCAAGTTGAACGAAGGTTCTGGACATTCACCTAGGAAGTTGTACTTAAGATACACTGTGAAGTGGTATGATTGGGATGAATCACTTCTCCCTGTCAAGATATATATCTTTGATATAACTGATACCGGGAAGACATCCGAGACCTCCACAGCATCTAATGCAAATCATCACTGCAAGATTGAGTATGAAATTGAGGCTTGCGAATCATCTGCTACGTCTGTTGATGGGTGCACTGACTCCAAGAGGATGACCTTTGTGATGCCAAGAGGCGGCTATGTGATTTATGGTGTTGCTCACCAGCACTCAGGAGGAATTGGCACAGCTCTTTATAGAAAGGATGGCCAAGTAATTTGTTCTTCAATGCCCTTCTATGGAATGGGGCAAGAGGCTGGAAACGAGACTGGATATATTGTAGGAATGTCGACCTGTTATCCTCACCCTGGCTCTGTAGAACTACTGGATGGAGAGACTCTGGTTCTTGAGTCCAACTATAGCAGTTCTCAAAGACACACCGGAGTTATGGGTCTTTTCTACATTTTGGTTGCTGATCAATTGCCAAGCCAAAAAAGCTCTTATGAGGCTCGAAATTATGTTGGTGCCGTACACATACCTGTCTCAGCTTGGGTAGTGCTTATCGGGGCACTTGCCATGGTTGCTCTCACTGCTTTTAGCTATCAGAGGAATCAAGGGGAAGATGGCTACCAGGCAATCTTGACCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_27989.p1 GENE.R_Transcript_27989~~R_Transcript_27989.p1 ORF type:complete len:466 (+),score=58.56,SURNod19|PF07712.8|6.8e-186 R_Transcript_27989:226-1623(+)
MAKPKSSFLYWLCIALVLSAEITWARTQQQTTMKSAAYLSAQFVMEPGSVANKFYYNIDFPKGHIGLKSFNAEVVDEFGVPVPLHDTYLHHWLVVRYYLRVGFEDKGLGSHPELHHRSDFLLVGNSGLCDKHTLGQYFGLGSETRKTATYVPDPYAIEVGNSDEVPPGYEERWLLNVHAIDTRGVVDRLGCTECRCDLYNVTVDEYGRPLSPDYEGGLYCCYDQTQCKLNEGSGHSPRKLYLRYTVKWYDWDESLLPVKIYIFDITDTGKTSETSTASNANHHCKIEYEIEACESSATSVDGCTDSKRMTFVMPRGGYVIYGVAHQHSGGIGTALYRKDGQVICSSMPFYGMGQEAGNETGYIVGMSTCYPHPGSVELLDGETLVLESNYSSSQRHTGVMGLFYILVADQLPSQKSSYEARNYVGAVHIPVSAWVVLIGALAMVALTAFSYQRNQGEDGYQAILT*

Click here to download the sequence:
Link to NCBI Protein BLAST