Transcript Information: R_Transcript_27989.p2


Annotated TAIR IDAT5G61820.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Stress up-regulated Nod 19 (InterPro:IPR011692); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:24834505-24836223 | Reverse length=475
E-Value2E-105
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5063123117972
Replicate 21.8855900859297
Replicate 31.3899719415141
Condition 2: 8 Hour
Replicate 12.4961318635541
Replicate 24.0705488788566
Replicate 33.8770430451312
Condition 3: 24 Hour
Replicate 11.8945763246164
Replicate 21.4453689078776
Replicate 32.3906473565786


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_27989.p2 GENE.R_Transcript_27989~~R_Transcript_27989.p2 ORF type:complete len:412 (+),score=51.00,SURNod19|PF07712.8|1.3e-163 R_Transcript_27989:2500-3735(+)
ATGACAAGAAATCAGTTCTCATGGTTCTACTCCTTAGCAATACTCTTGGCTCTCTCCTCTGAAATCTCCTTTTCTCATGCACAATCTAAGGCTGCGATCAAATCAGCTGTTTACTTATCACCTGCAATAACCCTGAAACCCGGATCAGTCGAAAACAGATTATTCTACAAAGTTGATTTTCCAAAGGGACACATTGGCATTAAGAGTTTCTATGCAGAATTAGTCAATGACGCTGGAGAATCTATCCCCCTTGTAGAAACATACATGCACCATTGGGCAGTTTTCAGATACTATGTCAACTTACAAAATCATTCAGATTTGATACTTGTCAGGAACAGTGGAGTTTGCCCTGATAATCTTCTTGGGCAGTATTTTGGGATGGGTTCTGAAACCCGGAAAACTGACACACATGTTCCCGACCCTTATGCCATCGAAGTAGGAAACCCTTCGGAAGTTCCACAAGGGTATGCAGAAGGATGGCTTCTTAACGTTCATGCAATTGATCTACGTGGTGTGGTGAACAGGACAGCTTGCACAGAGTGCAGGTGTAGCTTTTACAATGTAACCAAAGACGAGACTGGAAAGCCCTTGAAGCCCGGCTATGAAGGGGGATTCCACTGTTGCTATAATCAGACACATTGTATAGTAAAAGAAGGTGTTGCCCCCTCACCGAGGAGGGTATACTTGAGGTACACTGTCAAGTGGGTTGATTGGGATCAATCTGTGCTGCCTGTCAGGTTTTATATCTTGGATGTTACTGACACCACAACGACATCCATAAGTTCTGTCGCACCTACAAAGCATCACTGCAAGATTGAGTATGAAGTCAAGCCTTGTAAATATTTTGATGCTAAAGCGTGTGTGGACACCAAAAGGACAAAAATTGTTATTCCAAAAGGTGGCTATGTGGTTTATGGTGTTGGCCTTCAGTACCCAGGAGGAATTGGTGCATCTCTTTATAGAAAGGATGGACAGGTGATCTGTTCCTCGAAGCCGATATATGGGAAGGGGACGGAAGTAGGAAACGAGGCTGGATATATCGTTGGAATGTCAACCTGTTATCCTCAACCAGGCTCTGTACATATATCAGATGGAGAAACCGTGGTTCTTGAATCCAACTATAACAGTTCTGCAGAACACCCTGGTGCTGCTGGTTTTATCAAAATTATGGTTGCTGATCAAGCACCTAAGGAAAAAAGCTTTTTCGAGAGCCTCAGAAGTTCATTAAATTGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_27989.p2 GENE.R_Transcript_27989~~R_Transcript_27989.p2 ORF type:complete len:412 (+),score=51.00,SURNod19|PF07712.8|1.3e-163 R_Transcript_27989:2500-3735(+)
MTRNQFSWFYSLAILLALSSEISFSHAQSKAAIKSAVYLSPAITLKPGSVENRLFYKVDFPKGHIGIKSFYAELVNDAGESIPLVETYMHHWAVFRYYVNLQNHSDLILVRNSGVCPDNLLGQYFGMGSETRKTDTHVPDPYAIEVGNPSEVPQGYAEGWLLNVHAIDLRGVVNRTACTECRCSFYNVTKDETGKPLKPGYEGGFHCCYNQTHCIVKEGVAPSPRRVYLRYTVKWVDWDQSVLPVRFYILDVTDTTTTSISSVAPTKHHCKIEYEVKPCKYFDAKACVDTKRTKIVIPKGGYVVYGVGLQYPGGIGASLYRKDGQVICSSKPIYGKGTEVGNEAGYIVGMSTCYPQPGSVHISDGETVVLESNYNSSAEHPGAAGFIKIMVADQAPKEKSFFESLRSSLNW*

Click here to download the sequence:
Link to NCBI Protein BLAST