Transcript Information: R_Transcript_27991.p1


Annotated TAIR IDAT5G61820.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Stress up-regulated Nod 19 (InterPro:IPR011692); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:24834505-24836223 | Reverse length=475
E-Value3E-56
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.16081903924862
Replicate 20.0924947154903
Replicate 30
Condition 2: 8 Hour
Replicate 11.4022742040273
Replicate 20.29551826221831
Replicate 31.1194825933278
Condition 3: 24 Hour
Replicate 10.70795000261643
Replicate 20.29147919238648
Replicate 30.57852963930125


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_27991.p1 GENE.R_Transcript_27991~~R_Transcript_27991.p1 ORF type:internal len:227 (+),score=22.40,SURNod19|PF07712.8|7.2e-79 R_Transcript_27991:2-679(+)
GCTTGGCTTTTGCTCCTAGTTATGAGAATCTTTAACTTGTTCACTCTTTTGAGATATACAGAAAAGATGACAAGAAATCAGTTCTCATGGTTCTACTCCTTAGCAATACTCTTGGCTCTCTCCTCTGAAATCTCCTTTTCTCATGCACAATCTAAGGCTGCGATCAAATCAGCTGTTTACTTATCACCTGCAATAACCCTGAAACCCGGATCAGTCGAAAACAGATTATTCTACAAAGTTGATTTTCCAAAGGGACACATTGGCATTAAGAGTTTCTATGCAGAATTAGTCAATGACGCTGGAGAATCTATCCCCCTTGTAGAAACATACATGCACCATTGGGCAGTTTTCAGATACTATGTCAACTTACAAAATCATTCAGATTTGATACTTGTCAGGAACAGTGGAGTTTGCCCTGATAATCTTCTTGGGCAGTATTTTGGGATGGGTTCTGAAACCCGGAAAACTGACACACATGTTCCCGACCCTTATGCCATCGAAGTAGGAAACCCTTCGGAAGTTCCACAAGGGTATGCAGAAGGATGGCTTCTTAACGTTCATGCAATTGATCTACGTGGTGTGGTGAACAGGACAGCTTGCACAGAGTGCAGGTGTAGCTTTTACAATGTAACCAAAGACGAGACTGGAAAGCCCTTGAAGCCCGGCTATGAAGGGGGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_27991.p1 GENE.R_Transcript_27991~~R_Transcript_27991.p1 ORF type:internal len:227 (+),score=22.40,SURNod19|PF07712.8|7.2e-79 R_Transcript_27991:2-679(+)
AWLLLLVMRIFNLFTLLRYTEKMTRNQFSWFYSLAILLALSSEISFSHAQSKAAIKSAVYLSPAITLKPGSVENRLFYKVDFPKGHIGIKSFYAELVNDAGESIPLVETYMHHWAVFRYYVNLQNHSDLILVRNSGVCPDNLLGQYFGMGSETRKTDTHVPDPYAIEVGNPSEVPQGYAEGWLLNVHAIDLRGVVNRTACTECRCSFYNVTKDETGKPLKPGYEGG

Click here to download the sequence:
Link to NCBI Protein BLAST