Transcript Information: R_Transcript_28044.p1


Annotated TAIR IDAT5G26910.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G58650.1); Has 1322 Blast hits to 684 proteins in 162 species: Archae - 4; Bacteria - 497; Metazoa - 157; Fungi - 101; Plants - 155; Viruses - 0; Other Eukaryotes - 408 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:9466169-9469523 | Reverse length=853
E-Value1.3E-107
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.646553744485
Replicate 28.8235277877072
Replicate 310.911570274075
Condition 2: 8 Hour
Replicate 15.6568004828619
Replicate 24.4770962542308
Replicate 36.0904744105809
Condition 3: 24 Hour
Replicate 115.077899796413
Replicate 211.549288483955
Replicate 315.145617434608


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_28044.p1 GENE.R_Transcript_28044~~R_Transcript_28044.p1 ORF type:complete len:909 (+),score=198.89,DUF4378|PF14309.2|9.8e+03,DUF4378|PF14309.2|1.2e+04,DUF4378|PF14309.2|5.7e-32,VARLMGL|PF14383.2|7.9e-16 R_Transcript_28044:266-2992(+)
ATGGGAAGTGACAAACACGGATCGAAGAGTGGACGCTATGTTGGTGGCTTTTTGCAGCTGTTTGACTGGAATGCCAAGTCTAGTAGAAAGAAGCTGTTTTCCAGCAAATCCGATTTTCCAGAACATGCGAAGCAAGGAAAGAGAAGTGAGGGGAACTTGCCCGTGACAAGTTTTCGTCTGGTAGATGAAGACGAATATGGTGCAGGATTTAGTTTCAAGGGAGGCAGCGATTATAGCTGTGCATCATCTGTCACATCTGATGACGGATATGGTATAAAGGCTCCAGGTGTAGTTGCCAGGCTCATGGGACTCGACTCCTTGCCTACATCGAACCCACTGGAACAATACTGCACCCCATTTTTCGACACACTATCTGTTCGGGATGTCCCACTAAGACGACGAAATCTTGATTTTTACCATGATCATCAAGTCATGCACTCGAGGAATCTGATTGATAAGGCCGAGAGTCCTCCTAGGAGTGCAGTGGAGATAAGACCTCAAAAGATGCCTAACCAACCCATTGAGAGGTTTCAGATTGAAACTTTGCCTCCAAAGTCGGCTAAAACAATTCCAATCACACACCATAAGCTTCTGTCTCCAATCAAGAGTCCAATTTTCGTCCCGTCTCAAGATGCAGCTCAGATTATGGAAGCTGCTGCTAGAATCATAGAGCCGGGACCTCAAGCCACTCCGAGGACAAGATTATTTTCAGGGGGATCGTCATCAGTTCCATTTAAAGTTCGAGAACTGAAAGAGAAACTGGAAGCCGCACAAAGACCTTCGAAACCTGCTGAATCATCTCAGAGACCAGCTGAGTCAAATGCTGCTGAGTTTCTGAAAGGGCAGCCTATGAACAAGAGCTGGAATGGGTCACTTGATACGACATCATTCAAGGTTTCTCCGAGCAGGGATGATAGTTCTACGTCTGCTGCTGGCAAGAGTAAGGGAAAATCAATTTCGCTTGCCATCCAAGCGAAGGTCAATGTCCAGAAAAGGGAAGGATTGGCTTCGAGCAGTAGAAGTGGAGGAGGATCAGACGAACAGGATGAAACCAAGTCAGTTCAGTCATTCAGGAGTCAATCAAATGGTTCCAGGACGACAAACAGGAAATCTTCTAATCAAAGCACTTCTTCAGTGCTAAGGCAAAATAACCAGAAGCAAAATTGTCCCTCATACAGGGACAAACCTGCCTCCAAGTCTTCAGTTACAGCTCCAAAAGGTAAAAAGGCAGTTACTGAAGATGCTTCTCGTGTGAGACAAAAGAGTTTAACAAGAGAGGCCGGGACCTCAAGAAGAGGTTCAAGAAAATCTAGCTTGCAGGCAAGGGAAGGGGATAAAGAGGCTTCATATTCAGGAGTGCGAAATGTTCCTAGAAAGAAAAGGTCTATAGATGGGATTTTGCATTTCAAGAACCAGGTTGCAGAAAAAATGCAGGCTAACAGCAAGCATGAAGGCCCAAGCCACAGTACAGTGGGTGATAGGGAATATACTTGGATAGAAGAAAACCGAAGGAAAGGAATGGATGTTGTTTCTTTTACTTTCACTGCTCCTATTACTCGATTGACAGAGAAAAACAGCAGTCTTTCAACAGATGACAGAAGCAAAAAGTTAACAAGCCCTGATATCACAAGGTTATCTTCTTCGGGATTGAATGCGATAGGAGGTGATGCTTTAAGTATTTTGCTGGAGCAGAAGCTAAAAGAATTAACCTCTAACTTTGACAATTCCCACCATAACTTGATCAAAAAGGATACATCAGCTGAATCAGCTGAGCAGACCGTGGTAACTGACAGTGTGGAGAGTGCCAGAGGGAAAGCTCAAGAAAAAATGGCTCAACAAGAGCTGCAAGTAAACGATCTATATTCTGTCTTACCAACTCAACCTGAACAACAGCCCAGAGGACAGTACAGATTTCAGGCGATGGAAGCAATGGATGGATATAACAGCAGCAAGCCTGGAACTACTAAACAGTGGAGTGATTGTCAACTTCCCAGCCCAGTTTCCATTCTTGAACCTTCTACTTCTATGTTGACAGAAAGTTGCTATTCTTCAGAAAGCATATCGAGTAGCTTCACAGAAGAGAACAAGCATTGTTCATCAGTTCAGGGTCAAGAAGTGATTGCTTCAAGTTCGTTGCAGAAGCTTCATCGAATTGAAGCTGAAACAGACACATCAGATTCAGCCTCCTCGACATCATACCAAAGTGGTGCACCTAAAGATTCTGCAAAATCAACCGCATGGGAACTAGGATATGTGAAGGATATACTCTGCAATGTGGAGTTAATGTTTAAGGATTATGCATCAGGTCGAACACGTGAGATAGTGAATCCACATCTTTTTGATCAGTTAGAAAGAAGAAGAGGATTACAATCAGGAGAAAATGATGAGTTCAAAGTTGAGAGGAAAGTGTTGTTTGATTGTGTAACCGAATGTTTGGATTTGAAGTGCCAGCGTTTTGTGGGTGGTGGGTTCGAGACATGGACAAAAGGGATAGAGACGGTGAAGAGAAAGGATAGACTGGCTGAAGAAGTGTACAAGGAGATTCAGGGATGGAGAAGCCTAGGAAATAGCAATGTGGATGAACTTGTAGACAAGGATATGAGCAGTAAATATGGAAGATGGCTAGACTTTGAAGCTGATGAATTTATGCTTGGAGTAGAGATAGAGGGCCAGATATTCGATTCTTTAGTTGTGGAGATAGTTGCTGATACCTTTGCCTTCTTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_28044.p1 GENE.R_Transcript_28044~~R_Transcript_28044.p1 ORF type:complete len:909 (+),score=198.89,DUF4378|PF14309.2|9.8e+03,DUF4378|PF14309.2|1.2e+04,DUF4378|PF14309.2|5.7e-32,VARLMGL|PF14383.2|7.9e-16 R_Transcript_28044:266-2992(+)
MGSDKHGSKSGRYVGGFLQLFDWNAKSSRKKLFSSKSDFPEHAKQGKRSEGNLPVTSFRLVDEDEYGAGFSFKGGSDYSCASSVTSDDGYGIKAPGVVARLMGLDSLPTSNPLEQYCTPFFDTLSVRDVPLRRRNLDFYHDHQVMHSRNLIDKAESPPRSAVEIRPQKMPNQPIERFQIETLPPKSAKTIPITHHKLLSPIKSPIFVPSQDAAQIMEAAARIIEPGPQATPRTRLFSGGSSSVPFKVRELKEKLEAAQRPSKPAESSQRPAESNAAEFLKGQPMNKSWNGSLDTTSFKVSPSRDDSSTSAAGKSKGKSISLAIQAKVNVQKREGLASSSRSGGGSDEQDETKSVQSFRSQSNGSRTTNRKSSNQSTSSVLRQNNQKQNCPSYRDKPASKSSVTAPKGKKAVTEDASRVRQKSLTREAGTSRRGSRKSSLQAREGDKEASYSGVRNVPRKKRSIDGILHFKNQVAEKMQANSKHEGPSHSTVGDREYTWIEENRRKGMDVVSFTFTAPITRLTEKNSSLSTDDRSKKLTSPDITRLSSSGLNAIGGDALSILLEQKLKELTSNFDNSHHNLIKKDTSAESAEQTVVTDSVESARGKAQEKMAQQELQVNDLYSVLPTQPEQQPRGQYRFQAMEAMDGYNSSKPGTTKQWSDCQLPSPVSILEPSTSMLTESCYSSESISSSFTEENKHCSSVQGQEVIASSSLQKLHRIEAETDTSDSASSTSYQSGAPKDSAKSTAWELGYVKDILCNVELMFKDYASGRTREIVNPHLFDQLERRRGLQSGENDEFKVERKVLFDCVTECLDLKCQRFVGGGFETWTKGIETVKRKDRLAEEVYKEIQGWRSLGNSNVDELVDKDMSSKYGRWLDFEADEFMLGVEIEGQIFDSLVVEIVADTFAFF*

Click here to download the sequence:
Link to NCBI Protein BLAST