Transcript Information: R_Transcript_280478.p1


Annotated TAIR IDAT4G13620.1
Annotated Gene NameIntegrase-type DNA-binding superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:7932138-7933304 | Forward length=388
E-Value4.6E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.28744820401132
Replicate 20.33065040025666
Replicate 30.54110403770439
Condition 2: 8 Hour
Replicate 10.57840625859634
Replicate 20.17606993575737
Replicate 30.85755640726238
Condition 3: 24 Hour
Replicate 10.36154027130243
Replicate 20.34732691166264
Replicate 30.51703239417868


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_280478.p1 GENE.R_Transcript_280478~~R_Transcript_280478.p1 ORF type:3prime_partial len:127 (+),score=9.62,AP2|PF00847.16|2.7e-06 R_Transcript_280478:310-687(+)
ATGGAAATCATAGAATCTATTGACATTAGAGATTCACTATCAGCACTCATTTTAACAGCAGGTGCTACCAACACCAACACCTTGGATTCAATCTTCTCATACTGTCCACATAATTCAAACCCCACCACCACTACAACTCCTGAGCCACTGGGATCCTCAATTTACTTGAAACAAAGAGATATACTCCAACAATTCTGGCTCGAAAGCCGGCCCAACACTACGATCCCTAGCTCCGAATGTCAAGTGCCTTGCTTTGCTCTCAAGCCTGTGAAAAAGAAGTTATATAGGGGAGTGAGGCAAAGGCACTGGGGCAAATGGGTGGCTGAAATAAGACTACCTCAGAACAGAATGAGGGTCTGGTTGGGTACCTACGAAACA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_280478.p1 GENE.R_Transcript_280478~~R_Transcript_280478.p1 ORF type:3prime_partial len:127 (+),score=9.62,AP2|PF00847.16|2.7e-06 R_Transcript_280478:310-687(+)
MEIIESIDIRDSLSALILTAGATNTNTLDSIFSYCPHNSNPTTTTTPEPLGSSIYLKQRDILQQFWLESRPNTTIPSSECQVPCFALKPVKKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYET

Click here to download the sequence:
Link to NCBI Protein BLAST