Transcript Information: R_Transcript_280617.p1


Annotated TAIR IDAT1G54380.1
Annotated Gene Namespliceosome protein-related
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:20298287-20300899 | Reverse length=515
E-Value4E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.15381708669707
Replicate 20.58978371955893
Replicate 30.64344768528518
Condition 2: 8 Hour
Replicate 10.34390259757367
Replicate 20.56530319261424
Replicate 30.50987670281986
Condition 3: 24 Hour
Replicate 10.45141755784811
Replicate 20.49562379529387
Replicate 30.30741158268114


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_280617.p1 GENE.R_Transcript_280617~~R_Transcript_280617.p1 ORF type:5prime_partial len:356 (+),score=51.58,SIP1|PF04938.8|1.6e-18 R_Transcript_280617:3-1070(+)
AGGTTAGATATGCTTCTGCCTCAGCAGTCTCACTGTGAATCCTTGAGGAAGGCATCGTTTCTCACAGAAAGAATCCATTGGCGCCTTGCAGTCAATCCATTTAAGTGCATAATGTTGAAGTTCAACATCCAAGAACTCGGGTTTTTGTGTTATATTATAGGGAAAAACCAGGCTCTTCCCAAATTTGAACTAGGAAAACCAAGCAGCTCTGATATTAATCCAGCCATGGACAAATATGTGAAAGCGCAAAGCAGCAGCCTGGTTACTGATGAACAAAATGTGGAACCGGGAGAGCAAAGAAGCAGCCCGGTTACTGATGAAAAAAACATGGAACCAGGAGAGCAAAGCAGCAGCCTGGTTACTGATGAACAGACTGTCAAACCAGGAGAGCAACGAAGCAGCTCAGGCACTGATGAACAAAATGTAGAACCAGGGGAGGAAAGAAGCCATGCTCAAGTCACGTACTTGGGTACTGATGAACAAAATAAGAAATCAGGAAGCCGAAAAGTTGAATTTAACAAGGAGCAGATGGTTGACATTGACATGTCCTCTCTTTCTGTTATTAAGAAGCATCCGCTTATTCAGCTATGGAAGACTAGGGAACACCTCGTTATTTCAAGTTTTAAAGAGTTGCGACAGGCATTACAAAACCTTGATGAGACCCATGTTCAAAATCCTGACCCGCTATCAATTACGTTTCGCTCATTGTCAAGTACTATACACTGGTTTTGTATGGATTTTTTAACAGTGAGGTATCTTGAATTACCAACATGTGGTCCACTCTTAGCCAATGCCCGGGGCTTAGATCCAGCGGAACGGGTTGATAAGATCAGAGAGGGCATAAGGTCGATACACTATCACAACAGTTTCCCGCACGGATTTACTGTGCTCTTCGCTCTTTGTGCTGTAATTGATACTCCCTTGGATGCTGAAACCACTTCATCTCTCCGTCGTCTACTTGTAGACTGTGCTACGTTACTAGCTAAAAAATCTTACTGGGATGAAGAGGCCATAATGCTGAATATTCTGTTAACAATCTTGGAGAAAGTTTTTGGTATTTTAGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_280617.p1 GENE.R_Transcript_280617~~R_Transcript_280617.p1 ORF type:5prime_partial len:356 (+),score=51.58,SIP1|PF04938.8|1.6e-18 R_Transcript_280617:3-1070(+)
RLDMLLPQQSHCESLRKASFLTERIHWRLAVNPFKCIMLKFNIQELGFLCYIIGKNQALPKFELGKPSSSDINPAMDKYVKAQSSSLVTDEQNVEPGEQRSSPVTDEKNMEPGEQSSSLVTDEQTVKPGEQRSSSGTDEQNVEPGEERSHAQVTYLGTDEQNKKSGSRKVEFNKEQMVDIDMSSLSVIKKHPLIQLWKTREHLVISSFKELRQALQNLDETHVQNPDPLSITFRSLSSTIHWFCMDFLTVRYLELPTCGPLLANARGLDPAERVDKIREGIRSIHYHNSFPHGFTVLFALCAVIDTPLDAETTSSLRRLLVDCATLLAKKSYWDEEAIMLNILLTILEKVFGILD*

Click here to download the sequence:
Link to NCBI Protein BLAST