Transcript Information: R_Transcript_280857.p1


Annotated TAIR IDAT1G62914.1
Annotated Gene Namepentatricopeptide (PPR) repeat-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:23301576-23303162 | Forward length=528
E-Value1E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.28342971886055
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_280857.p1 GENE.R_Transcript_280857~~R_Transcript_280857.p1 ORF type:5prime_partial len:81 (+),score=12.23,PPR|PF01535.16|0.32,PPR|PF01535.16|4.3e-05,PPR_1|PF12854.3|3.1e+02,PPR_1|PF12854.3|5.4e-08,PPR_2|PF13041.2|3.1,PPR_2|PF13041.2|1.3e-06 R_Transcript_280857:1-243(+)
GGTGCTTTGTTTAAAGGCTTCTTTCGAGTTGGTAACAATGTTGGCGCTCTCTCCTTGCTTCGGAAGATTGAATCTTCTGGCCTTTGTCAGCCCAACATTGTCATCTATTCCACCCTCATTGACAGCCTGTTCAAAGACAGGCTATTGACAGAGGCCTTGACTCTCTTTTCTGGAATGAAAACAAGGGCATCTCCCCTAATGTTGTCACCTACACTTCCTTACTTCGTGGTCTTTGTAGTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_280857.p1 GENE.R_Transcript_280857~~R_Transcript_280857.p1 ORF type:5prime_partial len:81 (+),score=12.23,PPR|PF01535.16|0.32,PPR|PF01535.16|4.3e-05,PPR_1|PF12854.3|3.1e+02,PPR_1|PF12854.3|5.4e-08,PPR_2|PF13041.2|3.1,PPR_2|PF13041.2|1.3e-06 R_Transcript_280857:1-243(+)
GALFKGFFRVGNNVGALSLLRKIESSGLCQPNIVIYSTLIDSLFKDRLLTEALTLFSGMKTRASPLMLSPTLPYFVVFVV*

Click here to download the sequence:
Link to NCBI Protein BLAST