Transcript Information: R_Transcript_280860.p1


Annotated TAIR IDAT1G63080.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:23388884-23390728 | Reverse length=614
E-Value3E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.17721321315261
Replicate 20.20384757685726
Replicate 30.22239551064226
Condition 2: 8 Hour
Replicate 10.23772684414801
Replicate 20
Replicate 30.17622922932415
Condition 3: 24 Hour
Replicate 10.22289133230781
Replicate 20.64238618127895
Replicate 30.63750596175429


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_280860.p1 GENE.R_Transcript_280860~~R_Transcript_280860.p1 ORF type:internal len:103 (+),score=17.99,PPR_2|PF13041.2|5.9e-11,PPR_2|PF13041.2|1.9e-17,PPR_2|PF13041.2|1.1e-11,PPR_1|PF12854.3|85,PPR_1|PF12854.3|1.8e-11,PPR_1|PF12854.3|1.3e-11,PPR|PF01535.16|1.2,PPR|PF01535.16|5.5e-08,PPR|PF01535.16|1.6e-09,PPR_3|PF13812.2|86,PPR_3|PF13812.2|3.5e-07,PPR_3|PF13812.2|5.7e-05 R_Transcript_280860:3-308(+)
TCATCTATTCCACCCTCATTGTCAGCTTACAGGCTAGTAACCGAGGCCTTGACTCTCTTTTCTAAAATGAATAACAAGGGCATCTCCCCTGATGTTGTCACCTACACTTCCTTGCTTCGTGGTCTTTGTAGTTTAGGCCGATGGGATGAGGCTAAGGCCACCTTGACCGAGATGTTAGAGAGCAATGTAGCGCCAGATATCCACACATACACCACCCTCATTGATATGTATTGTAAAGAGGGGGAGGTTGGTGAAGCAAGATCCATATTTGACTTGATGACTAAGAGAGGTGAGAAGCCTAACATT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_280860.p1 GENE.R_Transcript_280860~~R_Transcript_280860.p1 ORF type:internal len:103 (+),score=17.99,PPR_2|PF13041.2|5.9e-11,PPR_2|PF13041.2|1.9e-17,PPR_2|PF13041.2|1.1e-11,PPR_1|PF12854.3|85,PPR_1|PF12854.3|1.8e-11,PPR_1|PF12854.3|1.3e-11,PPR|PF01535.16|1.2,PPR|PF01535.16|5.5e-08,PPR|PF01535.16|1.6e-09,PPR_3|PF13812.2|86,PPR_3|PF13812.2|3.5e-07,PPR_3|PF13812.2|5.7e-05 R_Transcript_280860:3-308(+)
SSIPPSLSAYRLVTEALTLFSKMNNKGISPDVVTYTSLLRGLCSLGRWDEAKATLTEMLESNVAPDIHTYTTLIDMYCKEGEVGEARSIFDLMTKRGEKPNI

Click here to download the sequence:
Link to NCBI Protein BLAST