Transcript Information: R_Transcript_280868.p1


Annotated TAIR IDAT4G20520.1
Annotated Gene NameRNA binding;RNA-directed DNA polymerases
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:11045912-11047716 | Forward length=376
E-Value8E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.054978798056382
Replicate 20.37945121234274
Replicate 30.20698859273632
Condition 2: 8 Hour
Replicate 10.59002084210229
Replicate 20.33676026869255
Replicate 30.60140878561523
Condition 3: 24 Hour
Replicate 10.20745006531058
Replicate 20.26572601072985
Replicate 30.2637072853843


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_280868.p1 GENE.R_Transcript_280868~~R_Transcript_280868.p1 ORF type:5prime_partial len:332 (+),score=21.61,RVT_1|PF00078.23|6.2e-33 R_Transcript_280868:1-996(+)
GCTATAGCTAAACCAGAGGCTTTAACATGTGATGAGTTTTCCAATCAACCGAGTATTGCAAGGATACTGAAGCTAATAATGTCTATGGACGCGTACAAAGCCCTGGGTCCAGATGGTTTTCAGCCTTTATTTTTCCAGCGAAATTGGGACATTGTTGGAGAGAGTCAGATTAACCATTCCTTGGACATTCTTCATGGCAGGGAATTTCTTGAGGGTTTCGATGAAACATTCATTGTACCCTTACCGAAAGTGGAAAGCCCAATGAGCATCAAACAATTTCGTCCGATCTCACTTTGTAATGTTATTTACAAGATCGTGACGAAAGTCATCGCTAATAGACTTAAACCTATCCTTCCAGCTCTGGTGTCACCTCATCAGGCTAGTTTCATCCCGGGGAGGCAAATTACCAACAATATTGTAATTGCCCAGGAAGTGATACACACTATGGGCAAAAAGCAGGGTGGCAAGGATCTCATGGCAATCAAAGTTGATTTCGAAAAAGCTTATGACAGGCTCCGGTGGGCCTTTATCCGCGAATCATTGATGGAGTTGAGACTTCCACAACACCTGATAGATATTATTATGCGGTGCATCTCAAGCACCTCCATGAGTGTCCTATGGAATGGAAGCCCGACAGAAAAGTTCATCCCTTCCAGAGGGGTGCGCCAAGGTAACCCCTTATCACCTTATCTCTTCGTTATTTGTATGTTGGCTGGCCGAGGATGGTACCTGTCACCTAGTCCTCTAGTTGGCTGTTTTCTAGTTAGTTTTTTTCCTACTGTCTTGTTTCTTGTTTTTCTTTTCTGTTGCTCTGTAGTTGGGTGTTTCACTCTCGTCGATTACCAAATATATATATATATATATATCATCCATCACAAAAATGATGGATGGAATGACAAAGTTATTGTCACATTTCCGACGTGGAGAACACAAAGGATGACTCATCTCTCGGCTTCCAAATGCTCCACGTCAATTTCATTTGGACTTGAATGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_280868.p1 GENE.R_Transcript_280868~~R_Transcript_280868.p1 ORF type:5prime_partial len:332 (+),score=21.61,RVT_1|PF00078.23|6.2e-33 R_Transcript_280868:1-996(+)
AIAKPEALTCDEFSNQPSIARILKLIMSMDAYKALGPDGFQPLFFQRNWDIVGESQINHSLDILHGREFLEGFDETFIVPLPKVESPMSIKQFRPISLCNVIYKIVTKVIANRLKPILPALVSPHQASFIPGRQITNNIVIAQEVIHTMGKKQGGKDLMAIKVDFEKAYDRLRWAFIRESLMELRLPQHLIDIIMRCISSTSMSVLWNGSPTEKFIPSRGVRQGNPLSPYLFVICMLAGRGWYLSPSPLVGCFLVSFFPTVLFLVFLFCCSVVGCFTLVDYQIYIYIYIIHHKNDGWNDKVIVTFPTWRTQRMTHLSASKCSTSISFGLEC*

Click here to download the sequence:
Link to NCBI Protein BLAST