Transcript Information: R_Transcript_280872.p1


Annotated TAIR IDAT1G67025.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G18390.1); Has 221 Blast hits to 191 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 221; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:25013344-25014435 | Reverse length=221
E-Value2E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.89916063816349
Replicate 20.41372020524725
Replicate 30.45136428760892
Condition 2: 8 Hour
Replicate 10.723720146224
Replicate 21.7624340367437
Replicate 31.3412520162848
Condition 3: 24 Hour
Replicate 10.45237058576757
Replicate 20.97781935968077
Replicate 31.9407816963751


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_280872.p1 GENE.R_Transcript_280872~~R_Transcript_280872.p1 ORF type:internal len:203 (+),score=27.53 R_Transcript_280872:1-606(+)
TGCTCTTCTCGGGTTTCGTGTGGGAGTGTTAAGAACATTGGCTATCCATTCTGGGGTGCTGGGAGACCCAGCTACTGTGGCCACCCAGCTTTGCAAATCCAGTGTTCCAGTAATCACACTGGTGATTACCCAACTGTAAATATAAGTTTTGGAGAATTGGGGAACCCTCAAAATGGAGACTGGAAAGTAGTTCATAGCATAGTCAAAATCCAGGAGAAACCAGCTGAAGACACGATCACCATTAAGATCAAGGAGTTGATTTCTCCCGATACTTGCTCGATCAGTTATATAGAAAAGGGAGTCGATGAGATCAGCCTATTTGAATACAGGTCACCTGTTCACAACATTAGCTTGGTTTATGGCAAAGACTGCCATGATCCGGAGTTGGTGGCTGGTCTGAACTCAATTACATGCCAAGCTAGTGGAACCAATCTTACTTCTTACTACATGCAGAACACTTCTTACTGGTTAAATAAGAAAAATTGCAAGGTTTTAAACATTTCAGTGCCGCTTGGAGAAGAGCTAGATGATCTTGTTAGAGCCAATGGTACACTTGCGAATGTCTTGCAGCAGGAGTTTGAGGTGTATTACTCTAAGAAATATTCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_280872.p1 GENE.R_Transcript_280872~~R_Transcript_280872.p1 ORF type:internal len:203 (+),score=27.53 R_Transcript_280872:1-606(+)
CSSRVSCGSVKNIGYPFWGAGRPSYCGHPALQIQCSSNHTGDYPTVNISFGELGNPQNGDWKVVHSIVKIQEKPAEDTITIKIKELISPDTCSISYIEKGVDEISLFEYRSPVHNISLVYGKDCHDPELVAGLNSITCQASGTNLTSYYMQNTSYWLNKKNCKVLNISVPLGEELDDLVRANGTLANVLQQEFEVYYSKKYS

Click here to download the sequence:
Link to NCBI Protein BLAST