Transcript Information: R_Transcript_28108.p1


Annotated TAIR IDAT4G23460.1
Annotated Gene NameAdaptin family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:12243899-12248898 | Reverse length=893
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 159.560161161901
Replicate 244.1831138616
Replicate 356.440574321263
Condition 2: 8 Hour
Replicate 143.563642075953
Replicate 246.80646298832
Replicate 361.123181600726
Condition 3: 24 Hour
Replicate 161.331234181003
Replicate 254.171240760097
Replicate 359.662822098801


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_28108.p1 GENE.R_Transcript_28108~~R_Transcript_28108.p1 ORF type:complete len:901 (+),score=252.31,Adaptin_N|PF01602.16|2.2e-167,Cnd1|PF12717.3|1.2e+03,Cnd1|PF12717.3|5.7e-37,Cnd1|PF12717.3|9.8,B2-adapt-app_C|PF09066.6|3.8e-27,HEAT_2|PF13646.2|1.2e+04,HEAT_2|PF13646.2|1.5e-09,HEAT_2|PF13646.2|0.11,HEAT_2|PF13646.2|0.025,HEAT_2|PF13646.2|25,HEAT|PF02985.18|5.9,HEAT|PF02985.18|0.0017,HEAT|PF02985.18|0.28,HEAT|PF02985.18|1.1e+03,Alpha_adaptinC2|PF02883.16|2.6e-07 R_Transcript_28108:174-2876(+)
ATGAGTGGTCACGATTCCAAGTACTTCTCCACTACAAAGAAGGGTGAAATCCCTGAGCTCAAAGAAGAGCTCAATTCTCAGTACAAGGATAAGAGAAAGGATGCTGTTAAAAAGGTTATTGCTGCGATGACTGTTGGGAAGGATGTTTCATCATTGTTCACTGATGTTGTGAACTGCATGCAAACAGAAAATTTAGAGTTGAAGAAGCTTGTGTATTTGTACCTCATCAATTATGCAAAGAGCCAACCAGACCTAGCAATTCTTGCAGTCAATACATTTGTGAAGGATTCACAAGACCCAAATCCTTTGATTCGGGCTTTGGCAGTGAGGACAATGGGTTGCATTCGTGTTGATAAAATTACTGAATATTTATGTGATCCCCTTCAGAGGTGCCTCAAGGATGATGATCCATATGTTCGCAAGACGGCCGCCATTTGTGTTGCTAAGCTTTTCGATATAAATGCTGAGCTAGTCGAGGATAGGGGATTTTTGGACTCGCTGAAGGACTTGATATCTGACAATAATCCAATGGTGGTGGCTAATGCTGTGGCAGCTCTTGCTGAGATTCAAGAGAATAGTGCTAGACCCATTTTTGAGGTCACCAGTGCCACACTTGCAAAGCTTCTTACTGCCCTCAATGAATGCACAGAGTGGGGTCAAGTTTTCATATTGGATGCGCTTTCAAGATATAAAGCAGCCGATGCTCGAGAAGCTGAGAACATTGTAGAGAGAGTTACCCCACGCTTACAACATGCAAATTGCGCTGTTGTTCTTTCAGCTGTGAAGATGATTCTTCAGCAGATGGAGTTAATTACTAGTACTGATGTTGTTCGAAACCTTTGTAAGAAAATGGCCCCTCCTCTCGTAACACTTCTTTCTGCAGAACCCGAAATACAATATGTTGCTCTGAGGAATATCAATCTCATTGTGCAAAAGAGGCCAACAATTCTGGCCCATGAAATTAAGGTGTTCTTTTGCAAGTACAATGACCCTATTTATGTGAAGATGGAGAAATTAGAAATTATTATCAAGCTTGCTTCGGACAGGAATATTGATCAGGTCTTGTTGGAGTTTAAAGAATATGCGACTGAAGTAGATGTAGATTTTGTTAGAAAAGCTGTTCGTGCTATCGGCCGTTGTGCTATAAAGTTAGAGAGAGCAGCTGAACGCTGCATTAGTGTTTTGCTGGAGCTGATCAAAATCAAAGTGAACTATGTTGTTCAGGAGGCAATTATAGTCATTAAAGATATCTTCAGAAGATACCCTAATACCTATGAGTCCATAATTGCCACACTCTGTGAGAGCTTAGACACTCTGGATGAGCCGGAGGCTAAGGCTTCCATGATTTGGATCATTGGTGAATATGCTGAAAGAATTGACAATGCCGATGAGTTGCTTGAGAGTTTCTTGGAGAGCTTCCCCGAGGAACCTCCACAAGTCCAGCTGCAATTGCTTACAGCAACTGTCAAGCTTTTCCTTAAGAAGCCAACTGAGGGGCCGCAGCAGATGATTCAGGCTGTTCTGAATAATGCCACTGTTGAGACTGACAATCCTGATCTACGTGATCGCGCTTACATTTATTGGCGTCTTCTTTCAACTGATCCTGAGGCAGCTAAAGATGTAGTGCTAGCTGAGAAGCCTGTGATCACTGATGATTCAAACCAGCTTGATCCTTCTCTTCTTGATGAACTTCTTGCAAATATTGCAACTTTATCTTCTGTGTATCACAAGCCACCAGAGGCATTTGTAACTCGTGTCAAGACAGTATCTCAGAGAACTGAGGAGGATGATTATCCTGAGGGAAGTGAACCAGGATATTCTGAATCACCTGCTCATGCTATTGACAGTGGTGCGTCACCTCCATCCAGCTCAGCAACCAGGCAGCCAGCTCCAGCCCCAGCTGGTTTTTCATCTCCTCCTCAAGCTCCTGTTCCTGATTTACTTGGTGATTTAATTGGCTTGGACAATTCAAGTTCTCTGGTACCTGTTGATCAACCTGCAGAAGTGGGCCCACCTTTGCCTGTGGTATTGCCTGCATCTAAAGGTCAAGGTCTACAAATCAGTGCCCAGCTTAGTCGGAGAGATGGACAAGTCTTCTACAGCATGCTGTTTGAGAACAATTCACAATCTGTTCTTGATGGGTTCATGATCCAGTTCAATAAGAACACATTTGGCCTTGCTGCTGGTGGACCTCTCCAGGTTCCACCATTGCAACCTGGGACCACAGCAAGGACTCTCCTTCCCATGGTTCTATTTCAAAATATAGCCCCTGGTCCTCCAAACACGCTCCTCCAGGTGGCAGTAAAGAACAACCAGCAACCTGTTTGGTACTTCAATGATAAAATTTCAATACATGCGTTCTTCACAGAAGATGGAAGAATGGAGCGTGCAACATTTTTGGAGACTTGGAAATCCCTTCCTGATACAAACGAGGTTTTGAAAGACTTCCCTGGCCTCGTGATAAATAGCATGGAAGCAACTCTTGACAAGTTGGCGGCATCAAACATGTTCTTCATAGCAAAGAGGAAAAATGCAAACCTGGAGGTATTGTACCTCTCTGCCAAGGTTCCTAGAGGAATTCCGTTCTTGATCGAATTGACTGCAGCTGTTGGAATTTCTGGTGTCAAGTGTGCAATCAAGACACCGAGCCCTGAAATGGCACCCCTCTTTTTTGAAGCAGTAGAGCATCTTCTCATGAATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_28108.p1 GENE.R_Transcript_28108~~R_Transcript_28108.p1 ORF type:complete len:901 (+),score=252.31,Adaptin_N|PF01602.16|2.2e-167,Cnd1|PF12717.3|1.2e+03,Cnd1|PF12717.3|5.7e-37,Cnd1|PF12717.3|9.8,B2-adapt-app_C|PF09066.6|3.8e-27,HEAT_2|PF13646.2|1.2e+04,HEAT_2|PF13646.2|1.5e-09,HEAT_2|PF13646.2|0.11,HEAT_2|PF13646.2|0.025,HEAT_2|PF13646.2|25,HEAT|PF02985.18|5.9,HEAT|PF02985.18|0.0017,HEAT|PF02985.18|0.28,HEAT|PF02985.18|1.1e+03,Alpha_adaptinC2|PF02883.16|2.6e-07 R_Transcript_28108:174-2876(+)
MSGHDSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLFDINAELVEDRGFLDSLKDLISDNNPMVVANAVAALAEIQENSARPIFEVTSATLAKLLTALNECTEWGQVFILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQYVALRNINLIVQKRPTILAHEIKVFFCKYNDPIYVKMEKLEIIIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNADELLESFLESFPEEPPQVQLQLLTATVKLFLKKPTEGPQQMIQAVLNNATVETDNPDLRDRAYIYWRLLSTDPEAAKDVVLAEKPVITDDSNQLDPSLLDELLANIATLSSVYHKPPEAFVTRVKTVSQRTEEDDYPEGSEPGYSESPAHAIDSGASPPSSSATRQPAPAPAGFSSPPQAPVPDLLGDLIGLDNSSSLVPVDQPAEVGPPLPVVLPASKGQGLQISAQLSRRDGQVFYSMLFENNSQSVLDGFMIQFNKNTFGLAAGGPLQVPPLQPGTTARTLLPMVLFQNIAPGPPNTLLQVAVKNNQQPVWYFNDKISIHAFFTEDGRMERATFLETWKSLPDTNEVLKDFPGLVINSMEATLDKLAASNMFFIAKRKNANLEVLYLSAKVPRGIPFLIELTAAVGISGVKCAIKTPSPEMAPLFFEAVEHLLMN*

Click here to download the sequence:
Link to NCBI Protein BLAST