Transcript Information: R_Transcript_28122.p1


Annotated TAIR IDAT2G02090.1
Annotated Gene NameSNF2 domain-containing protein / helicase domain-containing protein
Annotated Gene Symbol(s)CHR19, CHA19, ETL1
Annotation TypeOrtholog
Chromosome Positionchr2:523481-526884 | Forward length=763
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.396154941624
Replicate 27.5026047299076
Replicate 39.8942714747779
Condition 2: 8 Hour
Replicate 110.672503962608
Replicate 212.790190267799
Replicate 313.827535839091
Condition 3: 24 Hour
Replicate 111.448854127952
Replicate 29.151200351195
Replicate 313.923330468367


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_28122.p1 GENE.R_Transcript_28122~~R_Transcript_28122.p1 ORF type:complete len:764 (+),score=165.56,SNF2_N|PF00176.19|1.1e-52,Helicase_C|PF00271.27|1.3e-18,ResIII|PF04851.11|3e-06 R_Transcript_28122:254-2545(+)
ATGAAGACTAACAAGAGAGTTTTCGAAGAAATCTCCGACGATGAATGGGAGAACCAGTCCTTCAAACCCTCCAAAATCCTCAACTCCTCAAAACCACCGCCAATTGAATCCTTCTCCTTCAAGTCTCGCTCCTCCTCCTCATCTGCTCAACCTCCAAACAAAAACAATTTCGTCGTCGACCTATCAGACGACGAAGACGTAGAGGACGGAGTTCAGGTGGAGGATTTGGAGGACCATGACGTCGACGCTGAAGTCACCACAGGAAACGGAGGGTTTCGGAACTCCAATCGAGGACGGAGGTTCGTTGTCGACGACGATGACGAAGGAGAAGGAGACGGATTTGCGGAGGTTGTTGAATTGAAATCGGAAGAAGAGGAGGAAGTAGCAGGAACGGTGTCGTTTGACGAGGACGATGAGTTCGAAGACGAATTTGGGGAGGAAGAAGAAGACGATGTGGTTGGGAGAGCGTTGCAAAAGTGTGCGAAGATATCGGCGGATCTTCGGAGAGAGCTTTATGGTTCTTCCAGTGCCGTTGCTTGTGATCGTTACGCTGAGGTTGATTCTTCTTCGGTCAAGATTGTCAATCAGGACCATGTCAGTGCAGCATGCGAGGCTGATGATTCAGATTTTCAGCCTCTTCTCAAACCATATCAACTTGTTGGTGTCAACTTTCTTCTGTTGCTGAAAAGGAAAAAAATTGGAGGAGCTATATTGGCAGATGAGATGGGTCTGGGGAAAACTGTTCAGGCTATCACATATTTAACTCTGCTGAATCACTTGGAAAACGATCCAGGCCCACATTTAGTTGTATGCCCTGCTTCTGTCTTGGAGAATTGGGAAAGAGAGCTTACAAAATGGTGTCCATCATTTTCAGTGGTGCAGTACCATGGAGCTGGGAGATCAGCATATGCAAAAGAGTTGAATGCATTGTCCAAAGCTGGATTACCACCTCCGTTTAACGTCCTTCTTGTTTGTTACTCACTTTTTGAACGCCACAGCGCACAACAGAAAGATGACAGAAAAATTCTGAAACGTTGGCGATGGAGCTGTGTATTAATGGATGAAGCACATGCATTGAAGGATAAAAACAGCTACAGATGGAAGAATTTGATGTCAGTAGCAAGCAATGCCAACCAGCGTTTGTTGCTCACTGGAACTCCACTGCAAAATGATTTACATGAACTGTGGTCATTGTTGGAGTTCATGCTGCCTGATCTTTTTAATACAGAGAATGTAGACTTGAAAAAGGTACTAAATGCGGATGATAGAGATTTGATAGCTCGGATGAAGTCCATCTTAGGGCCATTCATTTTGAGGCGCTTGAAATCTGATGTAATGCAGCAACTTGTAGCCAAGGAACAAAGGGTTGAGTTCGTGTGCATGGAAAAAGAACAGCAAGATGCTTATGATGAAGCCATTTTAGAGTATCGTGCAGCATCAGCTCACTTTCGTAAGAACTCAATAGTCAATTCTAGTGATATTGTTCAAGCTCTTCCACGCCGTCAGATTTCGAATTACTTTGTACAGTTTCGTAAGATTGCAAATCATCCTTTGCTTGTTAGACGTATCTACAAAGATGAGGATGTTGTTCGATTTGCCAAGAAGCTTTACCCAATGGGTGTTTTTGGTTACGAGTGTACTCTTGAGAGAGTAATTGAGGAAATGAAGGGTTATAGCGACTTTTCGATTCATCGGCTTCTGTACAATTATGGCATCAAGGATGCAAGGGGGATTCTTCCAGAAAATCAGGTTATGGAGTCTGCGAAATGCCGGGCTTTGGCTAAACTTCTTCCTTCTCTGGAACAAGATGGTCACCGTGTCCTCATATTTAGCCAGTGGACATCAATGCTCGATATCTTGGAGTGGGCTTTGGATGTGATTGGTGTCACTTATAGACGTCTTGATGGAAGTACGCAGGTCTCCGAGAGGCAAAGCATAGTGGACATGTTTAATAATGATACTTCAATATTTGCATGCTTGCTTTCCACTAGAGCTGGAGGGCAAGGTTTGAACCTCATTGGAGCTGATACAGTCATCATACATGATTTGGATTTCAACCCTCAAATTGACCGGCAGGCAGAGGACCGCTGTCATCGTATTGGCCAGACAAAACCTGTTACCATATACAGGTTAGTAACGAAAAGTACTGTTGATGAGAATGTTTATAACATTGCAAAACGGAAGCTAGTTTTGGATGCTGCTGTTTTGGAGAATGGTGCCGTGGTGGACAATGAAGGTGATATGCCTGAGAAGACTATGGGTGAGATATTGTCATCGCTTTTGTTAGGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_28122.p1 GENE.R_Transcript_28122~~R_Transcript_28122.p1 ORF type:complete len:764 (+),score=165.56,SNF2_N|PF00176.19|1.1e-52,Helicase_C|PF00271.27|1.3e-18,ResIII|PF04851.11|3e-06 R_Transcript_28122:254-2545(+)
MKTNKRVFEEISDDEWENQSFKPSKILNSSKPPPIESFSFKSRSSSSSAQPPNKNNFVVDLSDDEDVEDGVQVEDLEDHDVDAEVTTGNGGFRNSNRGRRFVVDDDDEGEGDGFAEVVELKSEEEEEVAGTVSFDEDDEFEDEFGEEEEDDVVGRALQKCAKISADLRRELYGSSSAVACDRYAEVDSSSVKIVNQDHVSAACEADDSDFQPLLKPYQLVGVNFLLLLKRKKIGGAILADEMGLGKTVQAITYLTLLNHLENDPGPHLVVCPASVLENWERELTKWCPSFSVVQYHGAGRSAYAKELNALSKAGLPPPFNVLLVCYSLFERHSAQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVASNANQRLLLTGTPLQNDLHELWSLLEFMLPDLFNTENVDLKKVLNADDRDLIARMKSILGPFILRRLKSDVMQQLVAKEQRVEFVCMEKEQQDAYDEAILEYRAASAHFRKNSIVNSSDIVQALPRRQISNYFVQFRKIANHPLLVRRIYKDEDVVRFAKKLYPMGVFGYECTLERVIEEMKGYSDFSIHRLLYNYGIKDARGILPENQVMESAKCRALAKLLPSLEQDGHRVLIFSQWTSMLDILEWALDVIGVTYRRLDGSTQVSERQSIVDMFNNDTSIFACLLSTRAGGQGLNLIGADTVIIHDLDFNPQIDRQAEDRCHRIGQTKPVTIYRLVTKSTVDENVYNIAKRKLVLDAAVLENGAVVDNEGDMPEKTMGEILSSLLLG*

Click here to download the sequence:
Link to NCBI Protein BLAST