Transcript Information: R_Transcript_28131.p1


Annotated TAIR IDAT5G17230.3
Annotated Gene NamePHYTOENE SYNTHASE
Annotated Gene Symbol(s)PSY
Annotation TypeOrtholog
Chromosome Positionchr5:5659839-5662087 | Reverse length=437
E-Value2.7E-139
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 125.637113340946
Replicate 216.415289416378
Replicate 318.42951161145
Condition 2: 8 Hour
Replicate 114.691518968347
Replicate 218.29526696097
Replicate 318.564147225396
Condition 3: 24 Hour
Replicate 129.323381049931
Replicate 221.854756537027
Replicate 329.548401327311


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_28131.p1 GENE.R_Transcript_28131~~R_Transcript_28131.p1 ORF type:complete len:220 (+),score=45.88,SQS_PSY|PF00494.15|2.7e-59 R_Transcript_28131:719-1378(+)
ATGCTTGATGCTGCTTTGTCAGATACCGTGGCCAGGTTCCCTATTGACATCCAGCCTTTCAAAGATATGATTGAAGGAATGAGGATGGATCTTAGAAAGTCGAGATACAAAAACTTTGATGAATTGTACCTATATTGTTATTATGTAGCTGGGACGGTTGGATTGATGAGTGTTCCTGTGATGGGTATTGCACCTGAATCGAAGGCAACTACAGAAAGCGTCTACAATGCTGCCTTGGCATTGGGGATCGCGAATCAACTCACTAACATATTGAGAGATGTTGGAGAAGATGCAAGGAGAGGCAGGGTTTATTTGCCGCAAGATGAATTGGCACAGGCAGGTCTGTCAGATGAAGACATATTTGCTGGAAAGGTAACTGATAAATGGAGGACATTCATGAAGAAACAGATCAAACGAGCTAGGATGTTCTTTGATGAAGCCGAGAAAGGAGTCACAGAGCTTAGTGCAGCTAGCAGATGGCCTGTCTGGGCATCACTGCTTCTTTACCGTCAAATACTGGATGAGATCGAAACAAATGATTACAACAACTTCACCAAGAGGGCTTATGTTAGCAAAGGCAAGAAGCTACTCGCGTTGCCAATTGCTTATGCCAAGTCCGTGGTTTCTCCATCGAGAACATCTAGTCTTGCAAAAGTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_28131.p1 GENE.R_Transcript_28131~~R_Transcript_28131.p1 ORF type:complete len:220 (+),score=45.88,SQS_PSY|PF00494.15|2.7e-59 R_Transcript_28131:719-1378(+)
MLDAALSDTVARFPIDIQPFKDMIEGMRMDLRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPESKATTESVYNAALALGIANQLTNILRDVGEDARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRTFMKKQIKRARMFFDEAEKGVTELSAASRWPVWASLLLYRQILDEIETNDYNNFTKRAYVSKGKKLLALPIAYAKSVVSPSRTSSLAKV*

Click here to download the sequence:
Link to NCBI Protein BLAST