Transcript Information: R_Transcript_28134.p2


Annotated TAIR IDAT5G17230.3
Annotated Gene NamePHYTOENE SYNTHASE
Annotated Gene Symbol(s)PSY
Annotation TypeHomolog
Chromosome Positionchr5:5659839-5662087 | Reverse length=437
E-Value2E-49
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 128.750777876863
Replicate 211.749225103421
Replicate 318.990041530489
Condition 2: 8 Hour
Replicate 113.067585956302
Replicate 212.860403545967
Replicate 318.151610620387
Condition 3: 24 Hour
Replicate 125.336854608813
Replicate 218.055600542545
Replicate 328.578764668902


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_28134.p2 GENE.R_Transcript_28134~~R_Transcript_28134.p2 ORF type:complete len:193 (+),score=48.45,SQS_PSY|PF00494.15|1.3e-10 R_Transcript_28134:674-1252(+)
ATGAGTATGTCTGTGGCTTTACTATGGGTTGTATCTCCAACAACAGAAGTGTACAATGGGTTTAGTGTTTCGGATTCATTGGCTCCTCGTTCGATTTATGATGGAAAATCAAGGAAATTGTGTAAGAAGAAATCCCACAAGTGGAATCCTGTAGGAAAACAAAACAGGAGGATTGGATTTCCTGTGGTATCCAGCATGGTGGCAAATCCTGCAGGAGAAATGGCGGTTTTGACATCGGAGCAGAAGGTGTATGATGTAGTTCTAAAGCAAGCTGCCTTGGTTAATAAACAATTGAGGTCGAGGGACGATGATCTTGATCTCGATCTTGATGTTAAGCCAGATATTGCTGTTCCGGGGACCTTGAGCTTGCTTGGTGAGGCTTATGATAGATGTGGTGAAGTTTGTGCTGAGTATGCCAAGACTTTTTACTTGGGAACTCAGCTTATGACTCCTGAGAAAAGAAGGGCTATTTGGGCAATTTATGTGTGGTGTAGAAGGACAGATGAGCTTGTCGATGGGCCAAATGCGTCACACATAACACCAACTGCTTTGGATAGGTGGGAGGCAAGATCTATTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_28134.p2 GENE.R_Transcript_28134~~R_Transcript_28134.p2 ORF type:complete len:193 (+),score=48.45,SQS_PSY|PF00494.15|1.3e-10 R_Transcript_28134:674-1252(+)
MSMSVALLWVVSPTTEVYNGFSVSDSLAPRSIYDGKSRKLCKKKSHKWNPVGKQNRRIGFPVVSSMVANPAGEMAVLTSEQKVYDVVLKQAALVNKQLRSRDDDLDLDLDVKPDIAVPGTLSLLGEAYDRCGEVCAEYAKTFYLGTQLMTPEKRRAIWAIYVWCRRTDELVDGPNASHITPTALDRWEARSI*

Click here to download the sequence:
Link to NCBI Protein BLAST