Transcript Information: R_Transcript_28136.p1


Annotated TAIR IDAT5G17230.3
Annotated Gene NamePHYTOENE SYNTHASE
Annotated Gene Symbol(s)PSY
Annotation TypeOrtholog
Chromosome Positionchr5:5659839-5662087 | Reverse length=437
E-Value4.1E-109
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7023486900774
Replicate 20.32636736398391
Replicate 31.1868775956556
Condition 2: 8 Hour
Replicate 11.1418278990943
Replicate 21.042735422646
Replicate 31.2226473474872
Condition 3: 24 Hour
Replicate 13.5685710716638
Replicate 21.1427595280092
Replicate 31.8145247408827


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_28136.p1 GENE.R_Transcript_28136~~R_Transcript_28136.p1 ORF type:complete len:193 (+),score=34.41,SQS_PSY|PF00494.15|9.3e-50 R_Transcript_28136:1265-1843(+)
ATGCTTGATGCTGCTTTGTCAGATACCGTGGCCAGGTTCCCTATTGACATCCAGCCTTTCAAAGATATGATTGAAGGAATGAGGATGGATCTTAGAAAGTCGAGATACAAAAACTTTGATGAATTGTACCTATATTGTTATTATGTAGCTGGGACGGTTGGATTGATGAGTGTTCCTGTGATGGGTATTGCACCTGAATCGAAGGCAACTACAGAAAGCGTCTACAATGCTGCCTTGGCATTGGGGATCGCGAATCAACTCACTAACATATTGAGAGATGTTGGAGAAGATGCAAGGAGAGGCAGGGTTTATTTGCCGCAAGATGAATTGGCACAGGCAGGTCTGTCAGATGAAGACATATTTGCTGGAAAGGTAACTGATAAATGGAGGACATTCATGAAGAAACAGATCAAACGAGCTAGGATGTTCTTTGATGAAGCCGAGAAAGGAGTCACAGAGCTTAGTGCAGCTAGCAGATGGCCTGTAAGCATCGAATCCCCTCTCAGATTCAAATTATCAATCGTACATTACAAATTGCTTCCCAAAATAACAATCCTCTGTCCCAAAATAATGTTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_28136.p1 GENE.R_Transcript_28136~~R_Transcript_28136.p1 ORF type:complete len:193 (+),score=34.41,SQS_PSY|PF00494.15|9.3e-50 R_Transcript_28136:1265-1843(+)
MLDAALSDTVARFPIDIQPFKDMIEGMRMDLRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPESKATTESVYNAALALGIANQLTNILRDVGEDARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRTFMKKQIKRARMFFDEAEKGVTELSAASRWPVSIESPLRFKLSIVHYKLLPKITILCPKIMF*

Click here to download the sequence:
Link to NCBI Protein BLAST