Transcript Information: R_Transcript_281405.p1


Annotated TAIR IDAT5G48930.1
Annotated Gene Namehydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase
Annotated Gene Symbol(s)HCT
Annotation TypeOrtholog
Chromosome Positionchr5:19836654-19838092 | Reverse length=433
E-Value8.7E-124
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.1222170054124
Replicate 23.8216950319139
Replicate 33.767555525683
Condition 2: 8 Hour
Replicate 13.4903096964275
Replicate 22.9422212948928
Replicate 34.2990656732496
Condition 3: 24 Hour
Replicate 12.5173034240904
Replicate 23.5307760943249
Replicate 32.7359630858622


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_281405.p1 GENE.R_Transcript_281405~~R_Transcript_281405.p1 ORF type:complete len:456 (+),score=73.50,Transferase|PF02458.11|3.2e-90 R_Transcript_281405:55-1368(+)
ATGGTGAAGCCAGCTGAGGAGAGCCCAAGGCGAAAGCTTTGGTTGTCAAGCCTAGATTTGTACATCAGCCGTCCAAACACACACGTCCCTTCAGTTCAGTTCTACCGTTGTCCAAAGGATGTTGATAATGATGTCTTCATGAATGCCGAAAATCTGAAAGCTCTAAGTAAAGCTTTGGTGCCATTCTATCCCCTGGCCGGGAGGCTAATTATAAACGACCACGGTAGAACTCGAATGGAGATCGATTGCAACGGAGAAGGGGCCTTGTTTATGGAGGCCGAAACTCAAGAATACAGTCTTGCTGATTTTGAACAGAATGACTTTATACCAAGTGATGGAATGTTGGAGCTTGTTATCCCCAAGTGCGACTACTCCGGGGGACTCTCGTCATTTCCTTTGTTGATAGTGCAGCTCACCAGGTTTACTTGTGGTGGGGTTGCACTTGGGTTTGCCCAGAATCATCAGATAGGAGATGGAGCTGCTTATCTACACTTCATTTTGTCATGGTCTAGACTTGCAAGGGATCTTCACCTTGACTTTCCTCCTGTCCTTGATCGGGCTTCCTTCTTTGCTCCTCGTTGTCCCCGCAATGTTACCTTTTATCACTTGGAGTATGATGACCCTCCCTTGCCCATACGACCCCTCCAAGGTGATCTGCAAATAGAGACAACCACCACAAGTGTAGGGGTGTGCAAATTTTCCAAGGAACAAATTAATGCCTTAAAACTAGAAGCGACATTGTCACAGGAAGATAGCCAATACAAGCTAAGTACATTTGAGGTGCTAGCTGGTCACATATGGCGCAGTGCATGCAAGGCTCGTGGTCTCGCACAAGATCAAGAGGTCAAACTGAGCATACCAGTTGATGGACGGTCAAGATTGTCCCTACTACAAGGGTATTTTGGGAATGCCATCTTTCATGCAGCTTGTATGGAAAAAGCTGGGGATATTACTGAAAATCCATTGTGGTATGCTGCGACTCAGATTCACAAGGCTTTGAAGAAGATGAAGGATGAGGAGTACTTGAGATCAGCTATTGATTACTTGGAATCACAGCCTGATATAATGGCAATAGCTCGTGGAACCAATGCCTATAAGTTTCCTAAGTTACTTATAAACTCATGGGCTGGATTTCCTTTTCATGAATCGGATTTTGGGTGGGGCGGGCCCGTTTTCGGGGGCAATGGTGGAATCAGGTCCGAGGGGCAATGTTTTATACTCCAAAGCCCAGATGGGGATGGCAGCTTGCTAGTTACTGCTAAACTCTTCACTCCTCACATGACCTTGTTTCAAAAATATATGTATGACTTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_281405.p1 GENE.R_Transcript_281405~~R_Transcript_281405.p1 ORF type:complete len:456 (+),score=73.50,Transferase|PF02458.11|3.2e-90 R_Transcript_281405:55-1368(+)
MVKPAEESPRRKLWLSSLDLYISRPNTHVPSVQFYRCPKDVDNDVFMNAENLKALSKALVPFYPLAGRLIINDHGRTRMEIDCNGEGALFMEAETQEYSLADFEQNDFIPSDGMLELVIPKCDYSGGLSSFPLLIVQLTRFTCGGVALGFAQNHQIGDGAAYLHFILSWSRLARDLHLDFPPVLDRASFFAPRCPRNVTFYHLEYDDPPLPIRPLQGDLQIETTTTSVGVCKFSKEQINALKLEATLSQEDSQYKLSTFEVLAGHIWRSACKARGLAQDQEVKLSIPVDGRSRLSLLQGYFGNAIFHAACMEKAGDITENPLWYAATQIHKALKKMKDEEYLRSAIDYLESQPDIMAIARGTNAYKFPKLLINSWAGFPFHESDFGWGGPVFGGNGGIRSEGQCFILQSPDGDGSLLVTAKLFTPHMTLFQKYMYDF*

Click here to download the sequence:
Link to NCBI Protein BLAST