Transcript Information: R_Transcript_281406.p1


Annotated TAIR IDAT5G48930.1
Annotated Gene Namehydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase
Annotated Gene Symbol(s)HCT
Annotation TypeHomolog
Chromosome Positionchr5:19836654-19838092 | Reverse length=433
E-Value6E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4950090513644
Replicate 20.75526260490281
Replicate 30.82398336676807
Condition 2: 8 Hour
Replicate 11.2331011124512
Replicate 20.96521792120226
Replicate 31.044697014123
Condition 3: 24 Hour
Replicate 11.6516408077485
Replicate 20.47601278181102
Replicate 32.0470515174796


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_281406.p1 GENE.R_Transcript_281406~~R_Transcript_281406.p1 ORF type:complete len:139 (+),score=27.52,Transferase|PF02458.11|2e-25 R_Transcript_281406:212-628(+)
ATGGAGATCGATTGCAACGGAGAAGGGGCCTTGTTTATGGAGGCCGAAACTCAAGATCAATACAGTCTTGCTGATTTTGAACAGCATGATTTTACACCAAGTGATGGAATGTTTGAGCTTGTGATACCCAAGTGTGACTACTCCGGAGGACTCTCATCATTTCCTCTGTTGATAGTGCAGCTCACCAGGTTTACTTGTGGTGGGGTTGCACTTGGGTTTGCCCAGAATCATCAGATAGGAGATGGAGCTGCTTATCTACACTTCATTTTGTCATGGTCTAGACTTGCAAGGGATCTTCACCTTGACTTTCCTCCTGTCCTTGATCGGGCTTCTTTCCTTGCTTCTCGTTGTCCCAGCAATGTTCCCTTTTATCACTTGACCCTCCCTTGCCCATACGACCCCTCCAAGTTGAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_281406.p1 GENE.R_Transcript_281406~~R_Transcript_281406.p1 ORF type:complete len:139 (+),score=27.52,Transferase|PF02458.11|2e-25 R_Transcript_281406:212-628(+)
MEIDCNGEGALFMEAETQDQYSLADFEQHDFTPSDGMFELVIPKCDYSGGLSSFPLLIVQLTRFTCGGVALGFAQNHQIGDGAAYLHFILSWSRLARDLHLDFPPVLDRASFLASRCPSNVPFYHLTLPCPYDPSKLN*

Click here to download the sequence:
Link to NCBI Protein BLAST