Transcript Information: R_Transcript_281650.p1


Annotated TAIR IDAT5G18880.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6300535-6301422 | Reverse length=295
E-Value3E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.45919398628223
Replicate 20.79231322325653
Replicate 31.0084727243589
Condition 2: 8 Hour
Replicate 10.46199745183481
Replicate 20.42190343096577
Replicate 30.22832214616839
Condition 3: 24 Hour
Replicate 10.28877744940508
Replicate 20.13871232006652
Replicate 30.27531704008676


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_281650.p1 GENE.R_Transcript_281650~~R_Transcript_281650.p1 ORF type:complete len:159 (+),score=15.78,zf-RVT|PF13966.2|3.2e-10,zf-RVT|PF13966.2|3.6e+03 R_Transcript_281650:1297-1773(+)
ATGGTTTGGAGAAATTTTGCTAGACCTAGAGCTAAAGTTATCTTCTGGCTTGGTATGTTACAGAGACTAATGACAAAAGATAGAGTATGCAAATGGGATCCTAACTGTGATCCTATCTATATTTTAGGCAAGAAGGATCCAGAGACAAATGAGCACCTACTGGTTCACTGCTCTTACAACCAGAACATTATATCTAAATCAGTCCAGAAAATGAACACACAGTGGCAACAACCAGGTACTTGGCAACAATTGCTGGAGCAATGCAAGAGTATATGTAAAGGGAAGAAGCTTGTAGCTAAATGTGCTAAAACTATACTAGCAGAGGCTATTTATGCAATTCGGTGGGAAAGAAACCAGAGGATCTTCAAACAACAAGAAAGAACTGCTGATCAGATCAGTAAAGATACTATATACCTGGTTTGTATTAGAGGTCAAACTGATCCAGTTTTGGATAGCTTTTTGAATAGTCTGATATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_281650.p1 GENE.R_Transcript_281650~~R_Transcript_281650.p1 ORF type:complete len:159 (+),score=15.78,zf-RVT|PF13966.2|3.2e-10,zf-RVT|PF13966.2|3.6e+03 R_Transcript_281650:1297-1773(+)
MVWRNFARPRAKVIFWLGMLQRLMTKDRVCKWDPNCDPIYILGKKDPETNEHLLVHCSYNQNIISKSVQKMNTQWQQPGTWQQLLEQCKSICKGKKLVAKCAKTILAEAIYAIRWERNQRIFKQQERTADQISKDTIYLVCIRGQTDPVLDSFLNSLI*

Click here to download the sequence:
Link to NCBI Protein BLAST