Transcript Information: R_Transcript_28196.p2


Annotated TAIR IDAT5G18900.1
Annotated Gene Name2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:6304409-6306166 | Reverse length=298
E-Value1.3E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 178.335624097335
Replicate 276.111589009081
Replicate 365.093312669067
Condition 2: 8 Hour
Replicate 161.826808991794
Replicate 283.853306904446
Replicate 377.446871980318
Condition 3: 24 Hour
Replicate 176.143393971885
Replicate 277.009612292932
Replicate 373.141413162049


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_28196.p2 GENE.R_Transcript_28196~~R_Transcript_28196.p2 ORF type:complete len:120 (+),score=23.21,ShK|PF01549.20|0.00015 R_Transcript_28196:1111-1470(+)
ATGAACAGCTTTCTGAACGGCAAAAAAACGCTATTTCGGCAAATAATGAGTTGTCTGAATGTGGAAAGAGAGGCATCGCAGAAAGGAGATGCCCTTCTATTCTTCAGCCTTCACCCAAATGCTGTTCCTGATGAAATGAGTCTCCATGGGGGCTGTCCTGTGATTGAGGGTGAGAAATGGTCAGCAACAAAGTGGATTCATGTGGATGACTTCGATAAAACCCTTGTCGATGGTTGTACAGATCACAATCAGAATTGTGAGAGGTGGGCTGCTCTTGGTGAGTGCACTAAGAACCCAGAGTATATGGTAGGGACTCCTGAGCTTCCAGGATCTTGCCGGAGGAGTTGCAAAGTCTGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_28196.p2 GENE.R_Transcript_28196~~R_Transcript_28196.p2 ORF type:complete len:120 (+),score=23.21,ShK|PF01549.20|0.00015 R_Transcript_28196:1111-1470(+)
MNSFLNGKKTLFRQIMSCLNVEREASQKGDALLFFSLHPNAVPDEMSLHGGCPVIEGEKWSATKWIHVDDFDKTLVDGCTDHNQNCERWAALGECTKNPEYMVGTPELPGSCRRSCKVC*

Click here to download the sequence:
Link to NCBI Protein BLAST