Transcript Information: R_Transcript_28209.p1


Annotated TAIR IDAT3G28860.1
Annotated Gene NameATP binding cassette subfamily B19
Annotated Gene Symbol(s)ATMDR1, ATMDR11, PGP19, MDR11, MDR1, ATPGP19, ABCB
Annotation TypeOrtholog
Chromosome Positionchr3:10870287-10877286 | Reverse length=1252
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 127.147289305468
Replicate 213.936336126875
Replicate 322.21480116638
Condition 2: 8 Hour
Replicate 122.695165761914
Replicate 224.013951802418
Replicate 329.723623114465
Condition 3: 24 Hour
Replicate 134.527958088089
Replicate 225.351275322556
Replicate 330.77849729024


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_28209.p1 GENE.R_Transcript_28209~~R_Transcript_28209.p1 ORF type:complete len:1258 (+),score=244.85,ABC_membrane|PF00664.19|1.1e-56,ABC_membrane|PF00664.19|1.9e-50,ABC_tran|PF00005.23|2.1e-32,ABC_tran|PF00005.23|2.8e-31,SMC_N|PF02463.15|32,SMC_N|PF02463.15|0.00091,SMC_N|PF02463.15|2.6,SMC_N|PF02463.15|0.049,AAA_21|PF13304.2|1.4,AAA_21|PF13304.2|5.4,AAA_21|PF13304.2|0.56,AAA_21|PF13304.2|8.5,AAA_29|PF13555.2|0.043,AAA_29|PF13555.2|0.035,AAA_16|PF13191.2|0.011,AAA_16|PF13191.2|0.12,AAA_17|PF13207.2|0.0075,AAA_17|PF13207.2|3.4,Zeta_toxin|PF06414.8|0.053,Zeta_toxin|PF06414.8|0.35 R_Transcript_28209:476-4249(+)
ATGGCACAGAATAGTGGTAGTGGTGGAAATGATCATCAGGGAAAGGCAATGCCAGAAGCAGAGAAGAAAAAAGAGCAAACATTGCCATTTTATCAGCTCTTTTCTTTTGCTGATAAATATGATTACTTTTTAATGGGTTTGGGTAGCTTAGGTGCTGTTATTCATGGCTCTTCTATGCCTGTTTTTTTCCTCCTTTTTGGTCAAATGGTTAATGGCTTCGGCAAAAACCAATCTGATCTCAACTCCATGGTTCATGAAGTCTCCAAGTATGCTCTGTATTTTGTCTACCTGGGGCTCATTGTTTGTGCATCTTCCTACGCAGAAATTGCTTGTTGGATGTACTCTGGGGAGAGACAAGCTGGAACTTTGAGAAAGAAGTATTTGGAGGCAGTTTTAAAGCAAGATGTTGGGTTCTTTGACACTGATGCTAGAACTGGTGACATCGTATTCAGTGTTTCTACTGATACTCTTCTTGTCCAAGATGCCATTAGTGAGAAGGTGGGGAATTTCATACATTATCTATCGACATTTTTGGCGGGATTGGTGGTTGGTTTTGTATCAGCTTGGAAGCTAGCATTACTTAGTGTGGCAGTTATACCTGGAATTGCATTTGCTGGAGGTCTTTATGCTTATACTCTCACTGGCTTGACGTCAAAGAGTCGTGAATCTTATGCCAATGCTGGTATCATTGCTGAACAGGCCATTGCACAAGTACGGACGGTATACTCGTATGTTGGTGAGAGCAAGGCCCTTAATTCCTATTCTGATGCTATTCAAAATACCCTTAAGTTGGGTTACAAAGCTGGAATGGCGAAGGGTTTGGGGCTCGGATGTACCTATGGAATTGCTTGCATGTCATGGGCTCTTGTTTTCTGGTATGCTGGCGTTTTCATTAGGAACGGGCATACTGATGGAGGGAAGGCATTCACTGCCATTTTTTCTGCCATTGTTGGTGGCATGAGTTTAGGCCAGTCGTTCTCGAACCTTGGAGCATTTAGCAAAGGAAAAGCAGCTGGGTACAAGTTAATGGAAATTATCAAACAAAAGCCCACCATAGTTGAAGACAAGTGTGATGGAAAGTGTTTGGATGAAGTTAGTGGAAATATAGAATTCAAGAATGTATCATTCAGCTATCCGTCTCGTCCTGATGTCATGATCTTCCGAGACTTCTCATTGTTCTTCCCTGCTGGAAAGACTGTTGCAGTAGTCGGTGGTAGTGGATCAGGAAAGAGTACCGTGGTCTCACTCATAGAGAGATTCTATGATCCTAATGATGGGCAGGTTTTGCTGGATAATGTTGACATCAGAACACTGCAACTGAGATGGTTGCGCGGTCAAATTGGCCTGGTGAACCAAGAACCAGCTCTTTTCGCCACCACTATACTCGAGAATATTTTGTATGGAAAACCCGATGCTACAATGGCTGAAGTTGAAGCTGCTGCCTGTGCTGCAAATGCTCATAGCTTCATTACTCTGCTACCACATGGATACAACACTCATGTGGGTGAGAGGGGTGTCCAGCTTTCAGGAGGGCAGAAACAGAGAATTGCGATAGCAAGAGCAATGTTAAAGAACCCGAAAATTCTCCTCTTGGATGAAGCCACAAGTGCTTTAGATGCAAGCTCCGAGAGCATAGTACAAGAAGCCTTGGACAGGTTAATGGTTGGAAGAACCACTGTAGTAGTTGCTCACCGTCTTTCCACCATCAGAAACGTTGACACGATTGCTGTAATTCAGCAAGGAGAAGTTGTGGAGACTGGCACTCATGAGGAACTAATAGCTAAAACCGGTGCTTATGCATCGCTTATTCGATTCCAAGAGATGGTTGGAAATAGGGACTTCTCAAACCCTTCAACCCGTCGTACACGCTCATCACGGTTAAGCCATTCTCTCTCCACAAAATCCTTGAGCCTTCGGTCTGGTAGTTTAAGGAACTTGAGCTACTCATATAGCACAGGTGCTGATGGCCGAATTGAGATGGTCTCAGCTGCTGAGACTGAGAGGAAAAACCCTGCACCACGAGGATATTTCTGCCGGCTTCTAAAACTTAACGCTCCTGAATGGCCTTACTCAATCATGGGTGCTGTTGGATCCATACTCTCCGGTTTCATCGGTCCGACCTTTGCAATCGTGATGAGTAATATGATCGAGGTTTTCTACTACAGTAACTATGCCTCGATGGAGAGAAAAACTAAGGAATATGTCTTCATTTACATTGGGGCTGGTCTTTATGCTGTTGTTGCATACTTAATCCAACATTACTTCTTTAGCATCATGGGTGAAAACCTCACAACCAGAGTGAGGAGGATGATGCTTGCAGCGATTCTGAGGAATGAAGTCGGATGGTTCGATGAGGAGGAGCACAACTCCAGCATCCTAGCAGCTCGCCTAGCGACTGATGCAGCTGATGTGAAATCCGCTATTGCCGAAAGGATCTCCGTAATATTGCAAAACATGACTTCTCTTCTCACATCCTTCATTGTCGCCTTCATCGTCGAGTGGAGAGTCTCTCTTCTCATTCTAGGAACATTCCCACTACTAGTCCTTGCAAACTTTGCTCAGCAATTGTCTCTGAAAGGATTTGCAGGAGACACAGCAAAGGCACATGCAAAGACGAGCATGATAGCAGGTGAGGGAGTGAGCAACATCCGAACTGTGGCTGCATTCAATGCCCAGGAGAAGATCCTGTTACTCTTTAGCCAAGAGCTCCGGGCCCCACAGCGCCGCAGCCTGCGCCGAAGTCAAACATCTGGGGGTCTATTTGGCATTTCTCAGCTTGCTCTCTATGGATCCGAAGCCCTCATCCTGTGGTATGGTGCTCATCTAGTAAGCAAAGGGCTGTCCACATTCTCGAAGGTCATCAAGGTGTTTGTGGTCTTGGTCATTACGGCCAACTCAGTTGCTGAAACAGTCAGCCTCGCACCAGAGATCATCCGGGGTGGTGAAGCTGTGGGGTCCGTCTTTTCCATCCTGGACCGTACTACTAGAATTGACCCGGATGATTCAGAAGCCGAACCTGTGGAAACCATTCGTGGGGAGATTGAATTCCGTCATGTTGATTTTGCATACCCTACTCGCCCGGATGTCCTTGTGTTCAAGGATTTCAGCATAAGGATCCGAGCGGGTCAGAGTCAAGCCCTTGTTGGAGCTAGTGGTTCAGGGAAGAGCTCCGTCATTGCATTGATCGAGAGATTCTATGACCCGTGTGCTGGTAAAGTCATGATCGATGGCAAGGACATTAGGAGACTGAACCTTAAATCTCTAAGGCTTAAGATCGGTTTGGTGCAACAGGAGCCAGCTCTTTTTGCTTCCAGTATATTCGAGAACATTGCATATGGGAAAGGGGGAGGAGCAACAGAGGCCGAAGTCATCGAAGCTGCTCGAGCAGCCAATGTCCATGGTTTTGTGAGCGCATTGCCTGATGGTTACAAAACAGCAGTGGGGGAGAGAGGGGTTCAACTATCTGGAGGCCAGAAACAAAGGATTGCCATCGCTCGGGCGGTGCTCAAGGACCCCGCCATCCTGCTATTGGATGAGGCCACGAGCGCCCTTGATGCTGAGTCCGAGTGTGTGCTTCAAGAGGCTCTCGAGAGACTAATGCGGGGCCGGACCACAGTTCTTGTGGCCCACCGGCTGTCAACGATACGTGGGGTAGATAGCATCGGATTGGTCCAAGACGGTCGCATTGTAGAGCAAGGTAGTCACTCGGAGTTGGTTAGCCGGCCCGAGGGGGCTTACTCTAGGCTGTTGCAGTTACAACTCCACCATGTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_28209.p1 GENE.R_Transcript_28209~~R_Transcript_28209.p1 ORF type:complete len:1258 (+),score=244.85,ABC_membrane|PF00664.19|1.1e-56,ABC_membrane|PF00664.19|1.9e-50,ABC_tran|PF00005.23|2.1e-32,ABC_tran|PF00005.23|2.8e-31,SMC_N|PF02463.15|32,SMC_N|PF02463.15|0.00091,SMC_N|PF02463.15|2.6,SMC_N|PF02463.15|0.049,AAA_21|PF13304.2|1.4,AAA_21|PF13304.2|5.4,AAA_21|PF13304.2|0.56,AAA_21|PF13304.2|8.5,AAA_29|PF13555.2|0.043,AAA_29|PF13555.2|0.035,AAA_16|PF13191.2|0.011,AAA_16|PF13191.2|0.12,AAA_17|PF13207.2|0.0075,AAA_17|PF13207.2|3.4,Zeta_toxin|PF06414.8|0.053,Zeta_toxin|PF06414.8|0.35 R_Transcript_28209:476-4249(+)
MAQNSGSGGNDHQGKAMPEAEKKKEQTLPFYQLFSFADKYDYFLMGLGSLGAVIHGSSMPVFFLLFGQMVNGFGKNQSDLNSMVHEVSKYALYFVYLGLIVCASSYAEIACWMYSGERQAGTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGFVSAWKLALLSVAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDAIQNTLKLGYKAGMAKGLGLGCTYGIACMSWALVFWYAGVFIRNGHTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEIIKQKPTIVEDKCDGKCLDEVSGNIEFKNVSFSYPSRPDVMIFRDFSLFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNDGQVLLDNVDIRTLQLRWLRGQIGLVNQEPALFATTILENILYGKPDATMAEVEAAACAANAHSFITLLPHGYNTHVGERGVQLSGGQKQRIAIARAMLKNPKILLLDEATSALDASSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDTIAVIQQGEVVETGTHEELIAKTGAYASLIRFQEMVGNRDFSNPSTRRTRSSRLSHSLSTKSLSLRSGSLRNLSYSYSTGADGRIEMVSAAETERKNPAPRGYFCRLLKLNAPEWPYSIMGAVGSILSGFIGPTFAIVMSNMIEVFYYSNYASMERKTKEYVFIYIGAGLYAVVAYLIQHYFFSIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSILAARLATDAADVKSAIAERISVILQNMTSLLTSFIVAFIVEWRVSLLILGTFPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQEKILLLFSQELRAPQRRSLRRSQTSGGLFGISQLALYGSEALILWYGAHLVSKGLSTFSKVIKVFVVLVITANSVAETVSLAPEIIRGGEAVGSVFSILDRTTRIDPDDSEAEPVETIRGEIEFRHVDFAYPTRPDVLVFKDFSIRIRAGQSQALVGASGSGKSSVIALIERFYDPCAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFASSIFENIAYGKGGGATEAEVIEAARAANVHGFVSALPDGYKTAVGERGVQLSGGQKQRIAIARAVLKDPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDSIGLVQDGRIVEQGSHSELVSRPEGAYSRLLQLQLHHV*

Click here to download the sequence:
Link to NCBI Protein BLAST