Transcript Information: R_Transcript_282423.p2


Annotated TAIR IDAT1G10640.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:3515478-3517807 | Reverse length=532
E-Value1.2E-63
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.4418765579286
Replicate 25.2164721531175
Replicate 32.5610017188245
Condition 2: 8 Hour
Replicate 12.5854640006408
Replicate 23.0555242267459
Replicate 33.8332593856718
Condition 3: 24 Hour
Replicate 15.5612079619904
Replicate 24.9316106836074
Replicate 39.3804448658131


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_282423.p2 GENE.R_Transcript_282423~~R_Transcript_282423.p2 ORF type:complete len:161 (-),score=10.21,Glyco_hydro_28|PF00295.13|5e-22 R_Transcript_282423:591-1073(-)
ATGATTGCTTTGGCATTATTAGAATCTTCTTTGCAGCAGCGCACTTTTATCTCAGCAAATTCATTTACACTCCTATATTTGATCCTCCAGGGTGGCTCAGGCTCTGTGCAAGGTATAACGTTTTCAAATATTCAAGTCAGTGAAGTTCAGCTTCCTATAGTAATAGACCAGTATTATTGCGATAAAAGAACGTGCAAGAATCAAACAACAGCTGTCTCAGTATCAGATATCACATATCAAAATATAAAAGGTTCATACACAGTGAAACCAGTACACCTGGCTTGTAGTGATAACCTTCCATGCACAGACATAACCTTAAACCGCATTCAACTACAGCCACAGCAAGGACCATATCGGATATCAGAACCCTATTGCTGGCAAAGTTTTGGAGAGCTTACGACTCCTATTGTCCCTCCTATTGGTTGTTTTCAGATAGGAAAGCCATTGAAGAACAAGGTTCAGTCTGATGCTGATTTATGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_282423.p2 GENE.R_Transcript_282423~~R_Transcript_282423.p2 ORF type:complete len:161 (-),score=10.21,Glyco_hydro_28|PF00295.13|5e-22 R_Transcript_282423:591-1073(-)
MIALALLESSLQQRTFISANSFTLLYLILQGGSGSVQGITFSNIQVSEVQLPIVIDQYYCDKRTCKNQTTAVSVSDITYQNIKGSYTVKPVHLACSDNLPCTDITLNRIQLQPQQGPYRISEPYCWQSFGELTTPIVPPIGCFQIGKPLKNKVQSDADLC*

Click here to download the sequence:
Link to NCBI Protein BLAST