Transcript Information: R_Transcript_282471.p1


Annotated TAIR IDAT5G41620.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: intracellular protein transport protein USO1-related (TAIR:AT1G64180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:16646330-16648776 | Forward length=623
E-Value1E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0951776572831
Replicate 20.83985201665192
Replicate 30.9162695038461
Condition 2: 8 Hour
Replicate 10.24485864947245
Replicate 21.7888705472949
Replicate 30.72606442481548
Condition 3: 24 Hour
Replicate 10.91831228910816
Replicate 20.88221035562309
Replicate 30.43775409373795


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_282471.p1 GENE.R_Transcript_282471~~R_Transcript_282471.p1 ORF type:internal len:100 (+),score=22.37 R_Transcript_282471:2-298(+)
AAATACAGGACCGAAAAGGAACAGGTTACCAGAGACCATGTTGATAGCTTGGTTCTCCATATATCTGAGGCTTGGTTAGATGAACGGGTTCAGATGAAGGTTGCAGAAGATATGCATGAAGATATGAGAGGAAAGAGCACTGTTATGGACAAGCTAAGGCCTGAGATAGAAACTTTTCTAAAAGCTAGGCAGACCTTGGATTCTAGGGAAAACACTGACTTCCCCACCCAAAATTCCAAGGGTAGTGGCTTGCGTCGTCAGTCTTTGGAGTCCTTCCCCTTAAATGAGGCTACAAGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_282471.p1 GENE.R_Transcript_282471~~R_Transcript_282471.p1 ORF type:internal len:100 (+),score=22.37 R_Transcript_282471:2-298(+)
KYRTEKEQVTRDHVDSLVLHISEAWLDERVQMKVAEDMHEDMRGKSTVMDKLRPEIETFLKARQTLDSRENTDFPTQNSKGSGLRRQSLESFPLNEATR

Click here to download the sequence:
Link to NCBI Protein BLAST