Transcript Information: R_Transcript_282525.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value0.0003
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.30421601591198
Replicate 20.34993834027163
Replicate 30.76355791987175
Condition 2: 8 Hour
Replicate 10.13603258304025
Replicate 20.49690848535968
Replicate 30.10084228122437
Condition 3: 24 Hour
Replicate 10
Replicate 20.24505843211753
Replicate 30.72959015622991


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_282525.p1 GENE.R_Transcript_282525~~R_Transcript_282525.p1 ORF type:3prime_partial len:180 (+),score=22.18,gag_pre-integrs|PF13976.2|4.2e-08 R_Transcript_282525:1059-1595(+)
ATGCTCAAGCTGCTTGTGACACTGTTGTTCCTTCAGTGGGTTCAAATTCTGCTCCTACAACTTCTGGTACTCCCGTTCTCACTCAAGATCAGATTCAACAGCTTATTTCTTTGGTTTCACAGCACAGTTTGGATACTCCTTCTGGTACTTCTTCTATTTCACAGTCAGGTCAATCTTCAGCTTTCTTGGCAGGTGCCCTCAATGAGGCAGCATCCGGTCCTTGGTAAAGCACATGATGGATTGTACTTTGTTGATTCAAGTATGCAGCAATTATCCCCTGATTCTGCACAATCTGTCTGTCATGCTAATGTTGTTCATTCCAGCTCTTTGTTGTGGCATTGTAGGCTTGGACATATGCCTTTTGACAAAATAAAATGTATAGATTCCATTTCTTGCACTTCCTCTCCCCATGTTATCTGTGATGTATGTCCTAAGGCTAGACTGACTAGGACTTCTTTTCCTGTTACCCACATACAAACTCATTCAATTTTTGAGATGATTCATGTTGATCTTTGGGGTCCTTATGCTAATAGTACA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_282525.p1 GENE.R_Transcript_282525~~R_Transcript_282525.p1 ORF type:3prime_partial len:180 (+),score=22.18,gag_pre-integrs|PF13976.2|4.2e-08 R_Transcript_282525:1059-1595(+)
MLKLLVTLLFLQWVQILLLQLLVLPFSLKIRFNSLFLWFHSTVWILLLVLLLFHSQVNLQLSWQVPSMRQHPVLGKAHDGLYFVDSSMQQLSPDSAQSVCHANVVHSSSLLWHCRLGHMPFDKIKCIDSISCTSSPHVICDVCPKARLTRTSFPVTHIQTHSIFEMIHVDLWGPYANST

Click here to download the sequence:
Link to NCBI Protein BLAST