Transcript Information: R_Transcript_28280.p1


Annotated TAIR IDAT4G00830.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:352782-354965 | Forward length=495
E-Value9E-206
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 133.23271161165
Replicate 220.464748507025
Replicate 328.319300066129
Condition 2: 8 Hour
Replicate 126.138919120899
Replicate 228.96536170989
Replicate 335.575625034471
Condition 3: 24 Hour
Replicate 142.137747443254
Replicate 231.082094807818
Replicate 338.37274809032


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_28280.p1 GENE.R_Transcript_28280~~R_Transcript_28280.p1 ORF type:complete len:474 (+),score=159.07,RRM_1|PF00076.18|4.8e-24,RRM_1|PF00076.18|7.8e-10,RRM_1|PF00076.18|2.4e-12,RRM_6|PF14259.2|2.1e-13,RRM_6|PF14259.2|4.7e-05,RRM_6|PF14259.2|3.9e-12,RRM_5|PF13893.2|3.7e-07,RRM_5|PF13893.2|2.7,RRM_5|PF13893.2|0.00022,RRM_occluded|PF16842.1|0.0017,RRM_occluded|PF16842.1|0.0037,RRM_7|PF16367.1|0.002,RRM_7|PF16367.1|1.8e+02,RRM_7|PF16367.1|1.8e+02 R_Transcript_28280:218-1639(+)
ATGGCAGAGGGTTCAGAGATTGACGAGCGGGTGGATCTTGATGATGATAATTACATGGAAGAGACGGATGAAGATGTTGCTGACGGTGTTGATGAAGATGAGCCAGAGGAGGAAACTGGTGATGAGAAGGCTGAGGAACAGTATGAGGAGTTGAGGACTGATTGTAGTGGGAAAGAGCAATCACTTGATGGTGATCGAAGCCCCTTTGCTGGTGAACATGGAGAAGATGAAGAAAAGCATACAGCTTCTATGAATGAAGATGATAAAGAGAAGCATGCTGGACTTCTCTCTCTTCCTCCCTATGGGTCTGAGGTTTTCATTGGTGGACTTCCAAAGGATGCTTCAGAAGAAGATCTAAGAGATCTTTGTGAGAATATCGGTGAAATATTTGAGGTAAGGCTAATGAAAAATAAAGATACTGGTGAAAGCAAGGGATATGCATTTGTGGCATTTAAAACAAAGGAGGATGCCCAGAAGGCCATAGAAGAGCTCAAGAACAAAGAATTTAAGGGAAAGACGTTGAGATGCTCATTGTCTGATTCCAAGCATAGATTGTTCATAGGTAATATACCTAAAAGCTGGTCCGAGGATCAGTTCAAGCAAGTAATACATGATGTTGGCCCTGGTGCAGAGATGATTGACCTCAAGCAGGATGCTTTAAATCCTGGCCGCAACCGTGGTTTTGCTTTTATTGAGTACTACAACAATGCTTGTGCTGATTATGCTAGACAGAAAATGTCTAGTGCAAGTTTTAAGCTGGAGGGAAACACGCCTACTGTCACCTGGGCTGATCCAAAGAGTGCACCTGACTCTGCTGCAGCTTCCCAGGTTAAGGCACTCTATGTGAAGAATATACCTGACAGTGCCACTCCTGAGCAATTGAAGGAGCTCTTTCAGCGCCATGGGGAAGTTACGAAGGTTGTATTGCCTCCTGCTAAAGGTGGACAAGGCAAAGGCAACTTTGGATTTATCCATTTTTCAGAAAGGTCGAGTGCTTTGAAGGCTGTCAAAGACTCAGAGAAGTATGAGATTGATGGTCAGGCATTAGATGTTACTATGGCTAAGCCTCAGACAGATAAGAAGTCTGAAGCAGCTGCTTCCTTCAATGCTGCGACAAGCTTTCTTGCTCAACCAGCATATGGTTTCGGTGGGAATCCATATAATGCACTGGGGGCGAGCTATGGTGTTGCTGGTGGATACCAACAGCCAATGATATATGGGAGGGGTCCAATGCCTTCTGGCATGCAGATGGTGCCAATGGTTTTGCCTGACGGCCGAATTGGCTATGTCTTGCAGCAGCCTGGTGTTCAGATGCCACCAGTACGGCCAAGGAGAAATGACAGGTCCAATGCATCGGGTGGTTCCCAGGGAAGAGGAAGCGGGGATGACGGTAACAGGAGTAGAAGATACCGACCCTATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_28280.p1 GENE.R_Transcript_28280~~R_Transcript_28280.p1 ORF type:complete len:474 (+),score=159.07,RRM_1|PF00076.18|4.8e-24,RRM_1|PF00076.18|7.8e-10,RRM_1|PF00076.18|2.4e-12,RRM_6|PF14259.2|2.1e-13,RRM_6|PF14259.2|4.7e-05,RRM_6|PF14259.2|3.9e-12,RRM_5|PF13893.2|3.7e-07,RRM_5|PF13893.2|2.7,RRM_5|PF13893.2|0.00022,RRM_occluded|PF16842.1|0.0017,RRM_occluded|PF16842.1|0.0037,RRM_7|PF16367.1|0.002,RRM_7|PF16367.1|1.8e+02,RRM_7|PF16367.1|1.8e+02 R_Transcript_28280:218-1639(+)
MAEGSEIDERVDLDDDNYMEETDEDVADGVDEDEPEEETGDEKAEEQYEELRTDCSGKEQSLDGDRSPFAGEHGEDEEKHTASMNEDDKEKHAGLLSLPPYGSEVFIGGLPKDASEEDLRDLCENIGEIFEVRLMKNKDTGESKGYAFVAFKTKEDAQKAIEELKNKEFKGKTLRCSLSDSKHRLFIGNIPKSWSEDQFKQVIHDVGPGAEMIDLKQDALNPGRNRGFAFIEYYNNACADYARQKMSSASFKLEGNTPTVTWADPKSAPDSAAASQVKALYVKNIPDSATPEQLKELFQRHGEVTKVVLPPAKGGQGKGNFGFIHFSERSSALKAVKDSEKYEIDGQALDVTMAKPQTDKKSEAAASFNAATSFLAQPAYGFGGNPYNALGASYGVAGGYQQPMIYGRGPMPSGMQMVPMVLPDGRIGYVLQQPGVQMPPVRPRRNDRSNASGGSQGRGSGDDGNRSRRYRPY*

Click here to download the sequence:
Link to NCBI Protein BLAST