Transcript Information: R_Transcript_28281.p1


Annotated TAIR IDAT4G00830.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:352782-354965 | Forward length=495
E-Value7E-144
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 131.769394066757
Replicate 226.577595463668
Replicate 330.590643245495
Condition 2: 8 Hour
Replicate 127.172077979432
Replicate 229.342760559531
Replicate 333.699192712955
Condition 3: 24 Hour
Replicate 137.536499159221
Replicate 229.918842756627
Replicate 339.758045855313


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_28281.p1 GENE.R_Transcript_28281~~R_Transcript_28281.p1 ORF type:complete len:474 (+),score=159.39,RRM_1|PF00076.18|5.8e-23,RRM_1|PF00076.18|2.2e-08,RRM_1|PF00076.18|6.4e-13,RRM_6|PF14259.2|3.8e-14,RRM_6|PF14259.2|1.1e-05,RRM_6|PF14259.2|5e-12,RRM_5|PF13893.2|6e-06,RRM_5|PF13893.2|14,RRM_5|PF13893.2|0.00044,RRM_occluded|PF16842.1|0.0014,RRM_occluded|PF16842.1|0.0035,RRM_7|PF16367.1|0.0019,RRM_7|PF16367.1|1.2e+02,RRM_7|PF16367.1|2.4e+02 R_Transcript_28281:326-1747(+)
ATGGCAGATGGTTCAGAGATTGATGAGCGTGTGGATCTTGATGATGATAATTACATGGAAGAGACGGATGAAGATGTTGCTGACGGTGTTGATGAAGATGAGCCAGAGGAGGGAACTGGTGATGACAAGGCTGAGGAACAGTATCAAGAGTTGATAGCTGATGGTAGTGGGAAGGAGCAATCATCGGATGCTGATCAAAGCCCCATTGGTGATGAAAATGGAGGTGATGAAGAAAAACAAACAGCTTTGATTAGTGAAGATGATAAGGAGAAGCATGCTGAGCTTCTTTCTCTTCCGCCCTTTGGATCTGAGGTTTTCATTGGTGGACTTCCAAAGGATGTTTTGGAAGATGATTTAAGAGATCTGTGTGAGCCTATAGGTGAAATTCATGAGGTTAGGCTGATGAAAAATAAGGATACTGGTGAAAGCAAGGGGTATGCGTTTGTGGCTTTCAAAACAAAGGAGGATGCCCAGAAGGCCATAGAAGATTTGAAAAGCAAAGAATATAGGGGAAAGACTTTGAGATGCTCATTTTCTGATTCAAAGCATAGGCTGTTTATTGGTAATATACCTAAAAGTTGGTCAGATGATCAGTTTAAAAAAGTAATTCATGATGTTGGTCCTGGTGTAGTGATGATCGACCTCAAGCAGGATGCTTTAAATCCTGGCCGCAACCGTGGTTTTGCTTTTATTGAGTACTACAACAATGCTTGTGCTGATTATTCCAGACAGAAAATGTCTGGTGGAAGTTTTAAGCTAGAAGGAAACACCCCCACTGTTACCTGGGCAGATCCAAAGACTGCACCTGACTCTGTTGCAGCATCTCAGGTGAAGGCACTTTATGTGAAAAATATACCTGACAGTGCCACCCCTGAGCAATTGAAGGAGCTCTTTCAGCGCCATGGAGAAGTCACAAAGGTTGTGTTGCCTCCTGGTAAAGGTGGACAAGGCAAAGGAAATTTTGGGTTTATTCATTTTGCTGAAAGGTCGAGTGCTCTTAAGGCTGTCAAAGACTCGGAAAAGTATGAGATTGATGGTCAGGCATTAGATGTTACTATGGCTAAGCCTCAGACAGATAAGAAGTCTGAAGCAGCTGCTTCCTTCAATGCTGCGACAAGCTTTCTTGCTCAACCAGCATATGGTTTCGGTGGGAATCCATATAATGCACTGGGGGCGAGCTATGGTGTTGCTGGTGGATACCAACAGCCAATGATATATGGGAGGGGTCCAATGCCTTCTGGCATGCAGATGGTGCCAATGGTTTTGCCTGACGGCCGAATTGGCTATGTCTTGCAGCAGCCTGGTGTTCAGATGCCACCAGTACGGCCAAGGAGAAATGACAGGTCCAATGCATCGGGTGGTTCCCAGGGAAGAGGAAGCGGGGATGACGGTAACAGGAGTAGAAGATACCGACCCTATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_28281.p1 GENE.R_Transcript_28281~~R_Transcript_28281.p1 ORF type:complete len:474 (+),score=159.39,RRM_1|PF00076.18|5.8e-23,RRM_1|PF00076.18|2.2e-08,RRM_1|PF00076.18|6.4e-13,RRM_6|PF14259.2|3.8e-14,RRM_6|PF14259.2|1.1e-05,RRM_6|PF14259.2|5e-12,RRM_5|PF13893.2|6e-06,RRM_5|PF13893.2|14,RRM_5|PF13893.2|0.00044,RRM_occluded|PF16842.1|0.0014,RRM_occluded|PF16842.1|0.0035,RRM_7|PF16367.1|0.0019,RRM_7|PF16367.1|1.2e+02,RRM_7|PF16367.1|2.4e+02 R_Transcript_28281:326-1747(+)
MADGSEIDERVDLDDDNYMEETDEDVADGVDEDEPEEGTGDDKAEEQYQELIADGSGKEQSSDADQSPIGDENGGDEEKQTALISEDDKEKHAELLSLPPFGSEVFIGGLPKDVLEDDLRDLCEPIGEIHEVRLMKNKDTGESKGYAFVAFKTKEDAQKAIEDLKSKEYRGKTLRCSFSDSKHRLFIGNIPKSWSDDQFKKVIHDVGPGVVMIDLKQDALNPGRNRGFAFIEYYNNACADYSRQKMSGGSFKLEGNTPTVTWADPKTAPDSVAASQVKALYVKNIPDSATPEQLKELFQRHGEVTKVVLPPGKGGQGKGNFGFIHFAERSSALKAVKDSEKYEIDGQALDVTMAKPQTDKKSEAAASFNAATSFLAQPAYGFGGNPYNALGASYGVAGGYQQPMIYGRGPMPSGMQMVPMVLPDGRIGYVLQQPGVQMPPVRPRRNDRSNASGGSQGRGSGDDGNRSRRYRPY*

Click here to download the sequence:
Link to NCBI Protein BLAST