Transcript Information: R_Transcript_28290.p3


Annotated TAIR IDAT4G36980.4
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Splicing factor, suppressor of white apricot (InterPro:IPR019147).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:17433861-17437012 | Reverse length=556
E-Value1.5E-78
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.824192445859
Replicate 216.736181491252
Replicate 320.416874813962
Condition 2: 8 Hour
Replicate 118.275681808451
Replicate 222.198846465525
Replicate 323.544480442386
Condition 3: 24 Hour
Replicate 123.456889993524
Replicate 215.982071659839
Replicate 322.204917798302


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_28290.p3 GENE.R_Transcript_28290~~R_Transcript_28290.p3 ORF type:complete len:138 (+),score=17.63,DRY_EERY|PF09750.5|2.4e-28 R_Transcript_28290:231-644(+)
ATGTGGCACGAAGCACGGAGATCGGAGAAGAAAGTGCACGACATGATGGACGCAGCTCGAAAGAGAGCTCAAAGACGAGCCATCTTTCTTGCCAAGAGGCGTGGTGACCCTCAGCAATCCATTCAGGTCATTGCCTCTCGTTGCCGTACTTATCGTGACGATGGCCTCTATCAAGCCACTCAGGATCAACAGGGCCTGATACCGTGGAATGGGAAAGAGGATATTTTGATTGACAGATTTGATGGTAGAGCTCTTCTTGATTTTATCCGCGATCCAGACTCCCGCCGTTTTCGCGTACAAGAGAAGACCGAGGAAGAAGAGGAACTAGAAGAGTTTGTTAATTTTGAGCGTTATCGGGATTTAATTAAGCATCGACGTAGAGGATGTCGGTACTTTTTAGATCATGACTTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_28290.p3 GENE.R_Transcript_28290~~R_Transcript_28290.p3 ORF type:complete len:138 (+),score=17.63,DRY_EERY|PF09750.5|2.4e-28 R_Transcript_28290:231-644(+)
MWHEARRSEKKVHDMMDAARKRAQRRAIFLAKRRGDPQQSIQVIASRCRTYRDDGLYQATQDQQGLIPWNGKEDILIDRFDGRALLDFIRDPDSRRFRVQEKTEEEEELEEFVNFERYRDLIKHRRRGCRYFLDHDL*

Click here to download the sequence:
Link to NCBI Protein BLAST