Transcript Information: R_Transcript_28293.p1


Annotated TAIR IDAT4G36980.4
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Splicing factor, suppressor of white apricot (InterPro:IPR019147).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:17433861-17437012 | Reverse length=556
E-Value9.3E-196
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 122.906562386244
Replicate 215.799196352858
Replicate 320.468644238146
Condition 2: 8 Hour
Replicate 116.78857571878
Replicate 218.099030599177
Replicate 320.622745729598
Condition 3: 24 Hour
Replicate 122.332718417049
Replicate 216.159298593096
Replicate 321.129219871015


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_28293.p1 GENE.R_Transcript_28293~~R_Transcript_28293.p1 ORF type:complete len:404 (+),score=89.46,DRY_EERY|PF09750.5|9.8e-36,DRY_EERY|PF09750.5|7.8e+02 R_Transcript_28293:231-1442(+)
ATGTGGCACGAAGCCCGGAAATCGGAGAAGAAAGTGCACGACATGATGGACGCAGCTCGAAAGAGAGCTCAAAGACGAGCCATCTTTCTTGCCAAGAGGCGTGGTGACCCTCAGCAATCCATTCAGGTCATTGCCTCTCGTTGCCGTACTTATCGTGACGATGGCCTCTATCAAGCCACTCAGGATCAACAGGGCCTGATACCGTGGAATGGGAAAGAGGATATTTTGATTGACAGATTTGATGGTAGAGCTCTTCTTGATTTTATCCGCGATCCAGACTCCCGCCGTTTTCGCGTACAAGAGAAGACCGAGGAAGAAGAGGAACTAGAAGAGTTTGTTAATTTTGAGCGTTATCGGGATTTAATTAAGCATCGACGTAGAGGATTTACGGATGAAGAGGGTTTGGATCATGTGAATCAAGTAATGGAAGCCAAAAATACCTTGCCATTTGCTCTTGACAGATCACAAAAACCTCAGACTCCTGCAAGCAAGGGCACTTATTCTCAGGTGGGTTTTTCTTATGATGGGGATTTGAAAGAGGATGCACCTTCTTCAGACGAGGAAGACGATGATGAGGAAGATGAAGATGATGAAGAAGAATTCAACAGTGATGATAGTGGAGACGAACGTATGGAAACTATAGCTAAGGAATTTGGAGTGAAGAGATATGGTTGGCTCGTTTATATGGATAAGAAGGCAAAAGAGGAAGAGAAAAGGCAAAAAGAAGTGATTAAGGGAGATCCATCTATTAGAAAATTGAGTCGCAAGGAGAGAAGGAAGGCTTCTCAGCTAGAAAGGGAGAGAGAAAGGGAGGCTTCACGTATTACAGGAGCACGTGCTCTTCATAATGATCCTTATCGAGAGTCGAGGCGAAGTCCCACATACGATGCATATCCTCGTTCTAGAAGATCAAGATCGCGGTCCTACTCCCCATCATATTCCAGGCGTCATGGTCGTGGCCACTCAGATGATGGTCATCGGAGCAAGTCTAAGGCACCCAAAATAGAGTACATTACTGAGTTTGGAGGCTCTCCAGACAGAGGGCAACCGAAGTTGGAAGGAATCTCTCCACCAGCATCTCCTACTCAAGCTGATGTATCAAATCGGTCGGAGCACTGGACCTTTAACTATTGCCAAGATAGATTCACCAGTCTTTTCTGTGCTGCAGCTTATCCCCCATTTTGTTCCTTGGGACAAACTGTTGTGGTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_28293.p1 GENE.R_Transcript_28293~~R_Transcript_28293.p1 ORF type:complete len:404 (+),score=89.46,DRY_EERY|PF09750.5|9.8e-36,DRY_EERY|PF09750.5|7.8e+02 R_Transcript_28293:231-1442(+)
MWHEARKSEKKVHDMMDAARKRAQRRAIFLAKRRGDPQQSIQVIASRCRTYRDDGLYQATQDQQGLIPWNGKEDILIDRFDGRALLDFIRDPDSRRFRVQEKTEEEEELEEFVNFERYRDLIKHRRRGFTDEEGLDHVNQVMEAKNTLPFALDRSQKPQTPASKGTYSQVGFSYDGDLKEDAPSSDEEDDDEEDEDDEEEFNSDDSGDERMETIAKEFGVKRYGWLVYMDKKAKEEEKRQKEVIKGDPSIRKLSRKERRKASQLEREREREASRITGARALHNDPYRESRRSPTYDAYPRSRRSRSRSYSPSYSRRHGRGHSDDGHRSKSKAPKIEYITEFGGSPDRGQPKLEGISPPASPTQADVSNRSEHWTFNYCQDRFTSLFCAAAYPPFCSLGQTVVV*

Click here to download the sequence:
Link to NCBI Protein BLAST