Transcript Information: R_Transcript_282936.p1


Annotated TAIR IDAT1G63400.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:23507320-23509053 | Forward length=577
E-Value6E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.23401231993229
Replicate 20
Replicate 30.1468380615138
Condition 2: 8 Hour
Replicate 10.47088201821625
Replicate 20.14333898616145
Replicate 30.11635647833581
Condition 3: 24 Hour
Replicate 10.29433086189364
Replicate 20.14137986468319
Replicate 30.14030579927498


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_282936.p1 GENE.R_Transcript_282936~~R_Transcript_282936.p1 ORF type:internal len:156 (+),score=29.80,PPR_2|PF13041.2|9.7e-18,PPR_2|PF13041.2|2.2e-18,PPR_2|PF13041.2|1.5e-22,PPR_2|PF13041.2|5.5e-19,PPR_1|PF12854.3|2.4e-08,PPR_1|PF12854.3|3.1e-10,PPR_1|PF12854.3|1.2e-17,PPR_1|PF12854.3|2.4e-10,PPR_1|PF12854.3|3.1e-09,PPR|PF01535.16|3.7e-10,PPR|PF01535.16|2.3e-08,PPR|PF01535.16|2.4e-11,PPR|PF01535.16|6.4e-07,PPR|PF01535.16|0.08,PPR_3|PF13812.2|8.2e-06,PPR_3|PF13812.2|2.3e-05,PPR_3|PF13812.2|1.6e-07,PPR_3|PF13812.2|6.5e-07,PPR_3|PF13812.2|26,MRP-S27|PF10037.5|17,MRP-S27|PF10037.5|0.002,MRP-S27|PF10037.5|56 R_Transcript_282936:2-466(+)
CTCCACACATACAACACCCTCATTGATATGTGTTGTAAAGAGGGGGAGGTTGAGGAAGCAAAATCCATACTTGACTTGATGATTAAGAGGGGTGAGAGGCCTAACATTGTTACTTACTCTTCCCTACTGGATGGATATTGTTTGCGCGGTCAAATGGATGAAGCATCACAGTTAATGTATTTGATGGAAAAAGATGGGTGCCAACCTAATGTTGTCACCTTCACCACCATCATCAATGGGTATTGCAAGAGTAAGAACCTTGATGAAGCTTTCAGGCTATTCAAGGAAATGTCTTCTAGAGGATTGAGCCCCGATGTGAATACTTATAATACTCTTATAGACGGCTTGTCCAAGGGTACTAGGCTCCAACTTGCACTTCAACTCTTCAAAGAGATGCAAGCTCAGGGGATAACTCCAAATGTTGTCACCTTTAATACTTTGGTGGATGGCCTATGTAAGGATGGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_282936.p1 GENE.R_Transcript_282936~~R_Transcript_282936.p1 ORF type:internal len:156 (+),score=29.80,PPR_2|PF13041.2|9.7e-18,PPR_2|PF13041.2|2.2e-18,PPR_2|PF13041.2|1.5e-22,PPR_2|PF13041.2|5.5e-19,PPR_1|PF12854.3|2.4e-08,PPR_1|PF12854.3|3.1e-10,PPR_1|PF12854.3|1.2e-17,PPR_1|PF12854.3|2.4e-10,PPR_1|PF12854.3|3.1e-09,PPR|PF01535.16|3.7e-10,PPR|PF01535.16|2.3e-08,PPR|PF01535.16|2.4e-11,PPR|PF01535.16|6.4e-07,PPR|PF01535.16|0.08,PPR_3|PF13812.2|8.2e-06,PPR_3|PF13812.2|2.3e-05,PPR_3|PF13812.2|1.6e-07,PPR_3|PF13812.2|6.5e-07,PPR_3|PF13812.2|26,MRP-S27|PF10037.5|17,MRP-S27|PF10037.5|0.002,MRP-S27|PF10037.5|56 R_Transcript_282936:2-466(+)
LHTYNTLIDMCCKEGEVEEAKSILDLMIKRGERPNIVTYSSLLDGYCLRGQMDEASQLMYLMEKDGCQPNVVTFTTIINGYCKSKNLDEAFRLFKEMSSRGLSPDVNTYNTLIDGLSKGTRLQLALQLFKEMQAQGITPNVVTFNTLVDGLCKDG

Click here to download the sequence:
Link to NCBI Protein BLAST