Transcript Information: R_Transcript_282953.p1


Annotated TAIR IDAT5G16420.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:5368034-5369641 | Forward length=535
E-Value4.7E-37
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.20508944892942
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.25124586338411
Replicate 30
Condition 3: 24 Hour
Replicate 10.25795289019892
Replicate 21.2390594882347
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_282953.p1 GENE.R_Transcript_282953~~R_Transcript_282953.p1 ORF type:internal len:89 (+),score=0.36,PPR_1|PF12854.3|23,PPR_1|PF12854.3|1e+02,PPR_1|PF12854.3|1.3e-06,PPR_2|PF13041.2|2.3e+02,PPR_2|PF13041.2|7.6e-08,PPR|PF01535.16|1.9,PPR|PF01535.16|0.73,PPR|PF01535.16|0.33 R_Transcript_282953:1-264(+)
TGTGGGGAAATCCTCTTTGTAACCGTCATTCGAAACTACGGTCTTGCAGGTCGCCCAAACGACGCCGTTCGGACCTTCTTGAGGGCTCCAATTTTCGGGGTAAATCGGTCAGTTCGTAGTTTGAATTGTTTATTGAATTCCCTTGTACAGAACAAGAAATTTGATTGGGTTTATTTGATGTTCAAGAACTGTAGGACTAGGTTTAATGTTGTTCCTAATATTTTCACTTTTAATATTCTTGTTAAAGCCCTTTGTAAGAAGGGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_282953.p1 GENE.R_Transcript_282953~~R_Transcript_282953.p1 ORF type:internal len:89 (+),score=0.36,PPR_1|PF12854.3|23,PPR_1|PF12854.3|1e+02,PPR_1|PF12854.3|1.3e-06,PPR_2|PF13041.2|2.3e+02,PPR_2|PF13041.2|7.6e-08,PPR|PF01535.16|1.9,PPR|PF01535.16|0.73,PPR|PF01535.16|0.33 R_Transcript_282953:1-264(+)
CGEILFVTVIRNYGLAGRPNDAVRTFLRAPIFGVNRSVRSLNCLLNSLVQNKKFDWVYLMFKNCRTRFNVVPNIFTFNILVKALCKKG

Click here to download the sequence:
Link to NCBI Protein BLAST