Transcript Information: R_Transcript_2836.p1


Annotated TAIR IDAT5G46910.1
Annotated Gene NameTranscription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19046888-19050880 | Forward length=787
E-Value1.5E-295
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.153181409745
Replicate 27.7483436926269
Replicate 311.440035423457
Condition 2: 8 Hour
Replicate 110.318839477186
Replicate 212.182645752823
Replicate 318.215003905441
Condition 3: 24 Hour
Replicate 113.363100831027
Replicate 211.143169218289
Replicate 313.45367645481


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_2836.p1 GENE.R_Transcript_2836~~R_Transcript_2836.p1 ORF type:complete len:859 (+),score=160.15,JmjC|PF02373.18|1e-39,JmjN|PF02375.13|2.8e-13,zf-C5HC2|PF02928.12|9e+03,zf-C5HC2|PF02928.12|9.9e-07 R_Transcript_2836:603-3179(+)
ATGGTGGAAGGAAGGGTTTGTTTGTCGAAAGAGGCTAAAAATAGCTGTTTGGAGTTTCTGAAGCAGAAAAGGCTTCAGCGAAAATCTGAAACTGGAATAGAGGGTGGCAGGGTCTCTAGTACGATGGCCAGAAGTGGGGGAGATGCTTTGAGAGCTTCAGCATCATGTGGCTTCAGATTACATGGTGATGCAGATACATTTTCTTCCTCCATGGCTGTTTCAAATGGAAAGAACTACTTTTCAAAGCGCAAAGTGGACAAATTTAATATGACTGACCTAGATTGGATTGATAGGATTCCAGAATGCCCTGTATACTGTCCAACAAAGGAAGAGTATGAGGATCCTTTGGTTTATCTGCAAAAGATAGCGCCAGAAGCTTCTAAATATGGTATTTGCAAGATCATTTCCCCCATAAGCGCTTCTGTGTCTGCTGGGGTTGTATTGATGAAGGAAGAAGCAGGGTTTAAGTTTACAACTCGGGTACAGCCACTTCGCCTTGCTGAATGGAACACTGATGACAAGGTCACCTTTTTCATGAGTGGAAGAAATTATACATTCCGTGATTTCGAGAAAATGGCGAACAAGGAATTTTCACGTAGATACTGTAGCACTGCTTCTCTTCCTGCTTCTTTCTTGGAAAAGGAATTTTGGCATGAAATCGCTTCTGGGAGGGTAGAATCTGTTGAGTATGCATGTGATGTTGATGGAAGTGCATTTTCATCTTCTCCCAATGACCAACTTGGTAGAAGCAAATGGAATCTAAAGAATCTCTCTCGGCTATCCAAATCTGTCTTGAGGCTTTTGGAAAGAGCAATTCCGGGAGTGACAGATCCTATGCTTTACATTGGAATGCTGTTTAGTATGTTTGCCTGGCATGTGGAAGATCACTATCTGTACAGTATCAATTATCATCATTGTGGTGCACCAAAAACTTGGTATGGTGTACCTGGTGGTGCAGCTTTGCAATTCGAAAAAGTTGTTCGGGAGCATGTTTATGATGAAGATATTTTGTCAACTGATGGAGAGGATGGAGCGTTTGACGTACTCCTTGGGAAAACAACATTGTTTCCTCCAAGCATTCTGTTAGAAGGTGGCGTACCAGTCTATAAGGCTGTTCAAAAGCCAGGGGAATTTGTAATCACTTTCCCCAGAGCGTATCATGCAGGATTCAGCCACGGCTTTAATTGCGGCGAGGCAGTAAACTTTGCAATTGGGGACTGGTTTCCATTGGGAGCTGTGGCCAGTCGGCGTTACGCTCATCTTAATAGGGTGCCTCTGCTTCCCCACGAGGAACTTCTTTGCAAGGAAGCAATGCTTCTTTACAGACGTTTAGAATTCAAAGATCCAGATAATTCCATCATGGATTTAATTTCTCAATGTTCAGTTAAGGCTTCTTTTGTCCAACTGATGCGATTCCAGCATCATGCTCGGTGGGGTCTGACAAAAGCAGGGGTGTGTTCAGCAGTTTCAACGGATTGTTATGGCACAATTTTGTGCAGTGAGTGCAAACGTGACTGTTATATTGCTTATGTCAGCTGCAGCTGTTCATTGCATCCTGTGTGCTTGCGCCATGAGATGAGTTCAGTACTTTTCCCTTGTGGTGGTAGTTGCACCTTAGTGTTGAGGGATGATCTTCCGGAATTGGAGGCTGCAGCAAAGAAATTTGAGCAGGAGGACGGTGTGTTGGAGGAGCTCCAACAGCCTAGTAGAAACGAAGATTTGTGCTTGCTTGCTACTATGTTTCCAACTGAAGATGATGGATATTTTCCGTACTGCGAACTAAATTTTGAGTTGCATGCCAATGCTTGTTCACCAAGAGATCTAACACGGCAGCCACAATTTATATCTAATGACCATCCTATGTCAACCACTACTATAGAAAATGTTACTAATATGTCAGATACTTCACTTTCTTGTGCTGCCTCCACCCTCTGTTCTCTCCGGGTTAACGAATCCTCTCACCCCAACAATGTACAGGAGCACACTAACGCAAATGTAATTAATGACAATGAAGATGTCTCTCACAGCATATGCCAGTCTTCTGTATCATACAGTGAAAGCTTGAGTTCGACCATAGGAAATCAGCATGTGTCAGAAGTTATTCCTAATGTGGATCAGTGCAGTGACGATTCTGATTCAGAGATATTCAGGGTCAAGCGCCGATCTTCTTCAAAAATAGATAGAAAAAACGCCAATGGTGGGATGAGGGCAGATTCATGTAAACAACAGGGGCTTAAAAGATTGAAGAAAATTAAGCCAGAAGGGAGAGTTTGGGAGGTGGCACCTGCTGATCAATATGCATCTAATTATTTGAAAAGTGATGTCAACTTCAGGGATGCCAAAGTGAGTACTACAACTGATAGATGTGCCAGAGGAACTACAGTACCTGTAACCATCAGAGTGAAAAGAGTGCCTAGTGACACATCAACTTTTAGAAACAATGACCAACCATCCAGTGGTAGATTCCGGCATGAGACAGGGAAGATCATGAGAGAACAGCCTTCGTTAGAGATGGGGCCTAAACGTCTTAAAGTGAAAGGGCCTTTGTTTCTGGGCTTAGAGAACAGGTTAGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_2836.p1 GENE.R_Transcript_2836~~R_Transcript_2836.p1 ORF type:complete len:859 (+),score=160.15,JmjC|PF02373.18|1e-39,JmjN|PF02375.13|2.8e-13,zf-C5HC2|PF02928.12|9e+03,zf-C5HC2|PF02928.12|9.9e-07 R_Transcript_2836:603-3179(+)
MVEGRVCLSKEAKNSCLEFLKQKRLQRKSETGIEGGRVSSTMARSGGDALRASASCGFRLHGDADTFSSSMAVSNGKNYFSKRKVDKFNMTDLDWIDRIPECPVYCPTKEEYEDPLVYLQKIAPEASKYGICKIISPISASVSAGVVLMKEEAGFKFTTRVQPLRLAEWNTDDKVTFFMSGRNYTFRDFEKMANKEFSRRYCSTASLPASFLEKEFWHEIASGRVESVEYACDVDGSAFSSSPNDQLGRSKWNLKNLSRLSKSVLRLLERAIPGVTDPMLYIGMLFSMFAWHVEDHYLYSINYHHCGAPKTWYGVPGGAALQFEKVVREHVYDEDILSTDGEDGAFDVLLGKTTLFPPSILLEGGVPVYKAVQKPGEFVITFPRAYHAGFSHGFNCGEAVNFAIGDWFPLGAVASRRYAHLNRVPLLPHEELLCKEAMLLYRRLEFKDPDNSIMDLISQCSVKASFVQLMRFQHHARWGLTKAGVCSAVSTDCYGTILCSECKRDCYIAYVSCSCSLHPVCLRHEMSSVLFPCGGSCTLVLRDDLPELEAAAKKFEQEDGVLEELQQPSRNEDLCLLATMFPTEDDGYFPYCELNFELHANACSPRDLTRQPQFISNDHPMSTTTIENVTNMSDTSLSCAASTLCSLRVNESSHPNNVQEHTNANVINDNEDVSHSICQSSVSYSESLSSTIGNQHVSEVIPNVDQCSDDSDSEIFRVKRRSSSKIDRKNANGGMRADSCKQQGLKRLKKIKPEGRVWEVAPADQYASNYLKSDVNFRDAKVSTTTDRCARGTTVPVTIRVKRVPSDTSTFRNNDQPSSGRFRHETGKIMREQPSLEMGPKRLKVKGPLFLGLENRLD*

Click here to download the sequence:
Link to NCBI Protein BLAST